RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 DSEQ9UL01 958 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ARHGEF37A1IGU5 675 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 TGM5O43548 720 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 TBX10O75333 385 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
SS18-202ENST00000269138 RAP1GAPP47736 663 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 ROR1Q01973 937 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 RAB33AQ14088 237 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 FAM114A1Q8IWE2 563 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
SS18-202ENST00000269138 FEZF2Q8TBJ5 459 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 TAF4BQ92750 862 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 TATDN2Q93075 761 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
SS18-202ENST00000269138 NAT10Q9H0A0 1025 aaKnown RBP13.68□□□□□ -0.22
SS18-202ENST00000269138 CLEC1BQ9P126 229 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
SS18-202ENST00000269138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 WDR27A2RRH5 827 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 GABRDO14764 452 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 NCK2O43639 380 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 GLUD1P00367 558 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 LMO2P25791 158 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 ZNF165P49910 485 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 NOP14P78316 857 aaKnown RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 PPFIBP1Q86W92 1011 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 TMEM86AQ8N2M4 240 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 C12orf76Q8N812 135 aaPredicted RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 BPIFA3Q9BQP9 254 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
SS18-202ENST00000269138 UBE2ZQ9H832 354 aaPredicted RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 DDX43Q9NXZ2 648 aaKnown RBP13.67□□□□□ -0.22
SS18-202ENST00000269138 OR6C75A6NL08 312 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
SS18-202ENST00000269138 PMM2O15305 246 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
SS18-202ENST00000269138 VNN2O95498 520 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 PDGFRBP09619 1106 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
SS18-202ENST00000269138 ASPAP45381 313 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 LRMPQ12912 555 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 IQCB1Q15051 598 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 CLUL1Q15846 466 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 CCDC142Q17RM4 750 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 RNF19BQ6ZMZ0 732 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 KREMEN2Q8NCW0 462 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 HLA-CQ95604 372 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 CRACR2AQ9BSW2 395 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 CBX8Q9HC52 389 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 MAN1C1Q9NR34 630 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
SS18-202ENST00000269138 P4HA2O15460 535 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 ATP2C2O75185 946 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 TACC1O75410 805 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 ABLIM3O94929 683 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 SEC24AO95486 1093 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
SS18-202ENST00000269138 CPB1P15086 417 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 ZNF18P17022 549 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 KCNA5P22460 613 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 EEF1GP26641 437 aaKnown RBP13.65□□□□□ -0.22
SS18-202ENST00000269138 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
SS18-202ENST00000269138 LHX1P48742 406 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 TFF2Q03403 129 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 KRT31Q15323 416 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 VWA3BQ502W6 1294 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 ANKRD54Q6NXT1 300 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 OR6B3Q8NGW1 331 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 CASP10Q92851 521 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 PGLYRP2Q96PD5 576 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 BCO2Q9BYV7 579 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 IMPG2Q9BZV3 1241 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 SNX25Q9H3E2 840 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 FBXW11Q9UKB1 542 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 TSC2P49815 1807 aa13.65□□□□□ -0.22
SS18-202ENST00000269138 RFPL2O75678 378 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms