RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 AGMOQ6ZNB7 445 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 PEX26Q7Z412 305 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 LIMS2Q7Z4I7 341 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 TMEM35BQ8NCS4 154 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 HES6Q96HZ4 224 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 ZFP42Q96MM3 310 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 GDAP2Q9NXN4 497 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.42■□□□□ 0.38
TPM1-201ENST00000267996 OGDHLQ9ULD0 1010 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 V9GYY5 206 aaPredicted RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 NDST1P52848 882 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 MBTPS1Q14703 1052 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 ZNF564Q8TBZ8 553 aaPredicted RBP17.41■□□□□ 0.38
TPM1-201ENST00000267996 UBXN4Q92575 508 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 RPGRIP1Q96KN7 1286 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 ZNF560Q96MR9 790 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 ADAM22Q9P0K1 906 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 AMFRQ9UKV5 643 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 KIAA1257Q9ULG3 409 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 PACSIN2Q9UNF0 486 aaPredicted RBP17.41■□□□□ 0.38
TPM1-201ENST00000267996 SNX9Q9Y5X1 595 aa17.41■□□□□ 0.38
TPM1-201ENST00000267996 SPTLC1O15269 473 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 VDRP11473 427 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 CD19P15391 556 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 RRM1P23921 792 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
TPM1-201ENST00000267996 ITIH3Q06033 890 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 MTFR1Q15390 333 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 ANKRD7Q92527 254 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 CAPZA3Q96KX2 299 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 RPS6KC1Q96S38 1066 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 GAD1Q99259 594 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
TPM1-201ENST00000267996 CHORDC1Q9UHD1 332 aaPredicted RBP17.4■□□□□ 0.38
TPM1-201ENST00000267996 SKIP12755 728 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 CXCR5P32302 372 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 MLH1P40692 756 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 TAF6P49848 677 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 ELF2Q15723 593 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 CNGA2Q16280 664 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 SOWAHAQ2M3V2 549 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 PLEKHA7Q6IQ23 1121 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 LPPQ93052 612 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 PBKQ96KB5 322 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 DEFB118Q96PH6 123 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 PSMB7Q99436 277 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 ADAM2Q99965 735 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 MRPL45Q9BRJ2 306 aaKnown RBP17.39■□□□□ 0.37
TPM1-201ENST00000267996 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 GOLGA2P5Q9HBQ8 144 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 ALG6Q9Y672 507 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 ARL5CA6NH57 179 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 O00370 1275 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 CCL5P13501 91 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 SV2CQ496J9 727 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 MMS22LQ6ZRQ5 1243 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 ZNF598Q86UK7 904 aaKnown RBP17.39■□□□□ 0.37
TPM1-201ENST00000267996 UNC93AQ86WB7 457 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 C1orf131Q8NDD1 294 aaKnown RBP17.39■□□□□ 0.37
TPM1-201ENST00000267996 MIOSQ9NXC5 875 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.39■□□□□ 0.37
TPM1-201ENST00000267996 CEP83Q9Y592 693 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 NME7Q9Y5B8 376 aa17.39■□□□□ 0.37
TPM1-201ENST00000267996 TCRBV5S1A1TA0A578 114 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 DDX3YO15523 660 aaKnown RBP17.38■□□□□ 0.37
TPM1-201ENST00000267996 CALB1P05937 261 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 THP07101 528 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 HSPA6P17066 643 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 AFF1P51825 1210 aaKnown RBP17.38■□□□□ 0.37
TPM1-201ENST00000267996 LILRA4P59901 499 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 ORC1Q13415 861 aa17.38■□□□□ 0.37
TPM1-201ENST00000267996 KCNK3O14649 394 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 INPPL1O15357 1258 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 MICAL2O94851 1124 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 MESDQ14696 234 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 STILQ15468 1287 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 CFAP221Q4G0U5 840 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 SGO2Q562F6 1265 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 LCLAT1Q6UWP7 414 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 DPH6Q7L8W6 267 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms