RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HIPK3Q9H422 1215 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 JRKLQ9Y4A0 524 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 PALMO75781 387 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 LSM8O95777 96 aaKnown RBP24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 ATP1A1P05023 1023 aaKnown RBP24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 SSTR3P32745 418 aaPredicted RBP24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 NOP2P46087 812 aaKnown RBP24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 HADHBP55084 474 aaKnown RBP24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 AMPD2Q01433 879 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 GRIK3Q13003 919 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 ORC1Q13415 861 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 PPP1R2P3Q6NXS1 205 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 RHOT2Q8IXI1 618 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 DBF4BQ8NFT6 615 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 CPA5Q8WXQ8 436 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 GTF3C4Q9UKN8 822 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 MED7O43513 233 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 CYP1A2P05177 515 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 CD19P15391 556 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 IBSPP21815 317 aaPredicted RBP24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 RPL9P32969 192 aaKnown RBP24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 CDH5P33151 784 aaPredicted RBP24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 NSFP46459 744 aaKnown RBP24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 PAPD7Q5XG87 772 aaKnown RBP24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 MCOLN2Q8IZK6 566 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 LRRC57Q8N9N7 239 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 APBB2Q92870 758 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 NT5C1AQ9BXI3 368 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 WNT8AQ9H1J5 351 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 OSGEPQ9NPF4 335 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 NME7Q9Y5B8 376 aa24.36■■□□□ 1.49
SMARCB1-201ENST00000263121 MYH10P35580 1976 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 TDRD15B5MCY1 1934 aaKnown RBP24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 PODXLO00592 558 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 ENC1O14682 589 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 MON1BQ7L1V2 547 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 UNC93AQ86WB7 457 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 PHF13Q86YI8 300 aaPredicted RBP24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 KBTBD7Q8WVZ9 684 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 SEPT8Q92599 483 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 ZNF653Q96CK0 615 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 CACNG4Q9UBN1 327 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 KIAA1257Q9ULG3 409 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 MRFAP1Q9Y605 127 aa24.35■■□□□ 1.49
SMARCB1-201ENST00000263121 MTA2O94776 668 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 PARNO95453 639 aaKnown RBP24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 POMCP01189 267 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 CXCL10P02778 98 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 VDRP11473 427 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 CLCNKBP51801 687 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 TOP6BLQ8N6T0 577 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 TRIM11Q96F44 468 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 CALR3Q96L12 384 aaKnown RBP24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 ZNF518BQ9C0D4 1074 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 LHX5Q9H2C1 402 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 TBX21Q9UL17 535 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 L1RE1Q9UN81 338 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 COG5Q9UP83 839 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 ENPP3O14638 875 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 MYBL1P10243 752 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 IGFBP6P24592 240 aaPredicted RBP24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 TUBB2AQ13885 445 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 UPP1Q16831 310 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 DPH6Q7L8W6 267 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 SLFN11Q7Z7L1 901 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 APPL2Q8NEU8 664 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 SCLYQ96I15 445 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 VCPIP1Q96JH7 1222 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 TUBB2BQ9BVA1 445 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 C11orf49Q9H6J7 331 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 ELAC1Q9H777 363 aaKnown RBP24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 INPP5FQ9Y2H2 1132 aa24.34■■□□□ 1.49
SMARCB1-201ENST00000263121 CASTOR2A6NHX0 329 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 ATMINO43313 823 aaPredicted RBP24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 FAM163BP0C2L3 166 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 PTP4A2Q12974 167 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 TUSC3Q13454 348 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 TCTN1Q2MV58 587 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 CLLU1OSQ5K130 101 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 DENND1BQ6P3S1 775 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 GLB1LQ6UWU2 654 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 WDTC1Q8N5D0 677 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 TMEM35BQ8NCS4 154 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 HEXIM2Q96MH2 286 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 PPP1R12CQ9BZL4 782 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 AVENQ9NQS1 362 aaPredicted RBP24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 TMEM161AQ9NX61 479 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 CTTNBP2NLQ9P2B4 639 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 SCN5AQ14524 2016 aa24.33■■□□□ 1.49
SMARCB1-201ENST00000263121 O00370 1275 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 HUS1O60921 280 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 FGFR1P11362 822 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 TERF1P54274 439 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 CCL23P55773 120 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 C1QBPQ07021 282 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 CNGA2Q16280 664 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 SGO2Q562F6 1265 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 C1orf131Q8NDD1 294 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 C3orf58Q8NDZ4 430 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms