RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SPRED2Q7Z698 418 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 DNAJC7Q99615 494 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 EDEM3Q9BZQ6 932 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 MTIF3Q9H2K0 278 aaKnown RBP29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 PLEKP08567 350 aaPredicted RBP29.36■■■□□ 2.29
SMARCD3-201ENST00000262188 RFX1P22670 979 aa29.36■■■□□ 2.29
SMARCD3-201ENST00000262188 OR8K1Q8NGG5 319 aa29.36■■■□□ 2.29
SMARCD3-201ENST00000262188 KBTBD7Q8WVZ9 684 aa29.36■■■□□ 2.29
SMARCD3-201ENST00000262188 RSPH1Q8WYR4 309 aa29.36■■■□□ 2.29
SMARCD3-201ENST00000262188 FAM170AA1A519 330 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 TADA2AO75478 443 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 ARHGEF15O94989 841 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 AARSP49588 968 aaKnown RBP eCLIP29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 SFMBT2Q5VUG0 894 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 OSTM1Q86WC4 334 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 P4HA1P13674 534 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 STAT1P42224 750 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 APPL2Q8NEU8 664 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 IQCDQ96DY2 449 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 RAD9AQ99638 391 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 CHP1Q99653 195 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 LPIN3Q9BQK8 851 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 GPR62Q9BZJ7 368 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 INSL6Q9Y581 213 aa29.35■■■□□ 2.29
SMARCD3-201ENST00000262188 HUS1O60921 280 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 ALDH7A1P49419 539 aaKnown RBP29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 KCNT2Q6UVM3 1135 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 ENOSF1Q7L5Y1 443 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 FAM71AQ8IYT1 594 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 PHOSPHO2Q8TCD6 241 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 WHAMMQ8TF30 809 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 TMEM175Q9BSA9 504 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 RASSF4Q9H2L5 321 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 ADAM28Q9UKQ2 775 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 KIAA1671Q9BY89 1806 aa29.34■■■□□ 2.29
SMARCD3-201ENST00000262188 LMO2P25791 158 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 GSDMDP57764 484 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 IRF2BP2Q7Z5L9 587 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 SLC47A2Q86VL8 602 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 ADGRF2Q8IZF7 708 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 RBBP8NLQ8NC74 664 aaPredicted RBP29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 MYCBPQ99417 103 aaPredicted RBP29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 LINC00271P0C7V0 271 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 SSTR3P32745 418 aaPredicted RBP29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 NOP2P46087 812 aaKnown RBP29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 NDST1P52848 882 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 ASIC2Q16515 512 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 CCDC142Q17RM4 750 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 TAS1R1Q7RTX1 841 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 LRRC8AQ8IWT6 810 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 FIBCD1Q8N539 461 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 COLGALT1Q8NBJ5 622 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 OR6B3Q8NGW1 331 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 COLEC11Q9BWP8 271 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 KCNF1Q9H3M0 494 aa29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.33■■■□□ 2.29
SMARCD3-201ENST00000262188 PDGFRBP09619 1106 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 TKTP29401 623 aaKnown RBP29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 LIMS2Q7Z4I7 341 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 SUSD3Q96L08 255 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 ELOVL4Q9GZR5 314 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 DPEP3Q9H4B8 488 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 TMEM189-UBE2V1I3L0A0 370 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 ACAT1P24752 427 aaKnown RBP29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 HGSNATQ68CP4 663 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 TMEM139Q8IV31 216 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 ZNF558Q96NG5 402 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 VN1R3Q9BXE9 311 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 CYP3A43Q9HB55 503 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 AIPL1Q9NZN9 384 aa29.32■■■□□ 2.28
SMARCD3-201ENST00000262188 PDE4DIPQ5VU43 2346 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 CILPO75339 1184 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 TOP6BLQ8N6T0 577 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 SLC20A1Q8WUM9 679 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 PANX2Q96RD6 677 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 ARHGAP20Q9P2F6 1191 aa29.31■■■□□ 2.28
SMARCD3-201ENST00000262188 M0QZQ0 153 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 PBX2P40425 430 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 RGS19P49795 217 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 FAM171A1Q5VUB5 890 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 FUT10Q6P4F1 479 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 CEP57Q86XR8 500 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 GBF1Q92538 1859 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 CHD7Q9P2D1 2997 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 RAD23BP54727 409 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 IGSF21Q96ID5 467 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 FAM81BQ96LP2 452 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 NCAPGQ9BPX3 1015 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 HAUS4Q9H6D7 363 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 MYO6Q9UM54 1294 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 BARX2Q9UMQ3 279 aaPredicted RBP29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 DAAM1Q9Y4D1 1078 aa29.3■■■□□ 2.28
SMARCD3-201ENST00000262188 TSC2P49815 1807 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 ODC1P11926 461 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 ZNF132P52740 706 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 INCA1Q0VD86 236 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 MTF1Q14872 753 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 TDRD12Q587J7 1177 aaKnown RBP29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 SLC39A11Q8N1S5 342 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 SP7Q8TDD2 431 aaPredicted RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms