RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CCNG2Q16589 344 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 TRMT5Q32P41 509 aaKnown RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 RNF220Q5VTB9 566 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CMTM5Q96DZ9 223 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 MTMR9Q96QG7 549 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 NDUFA13Q9P0J0 144 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 PSMG1O95456 288 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 SSTR1P30872 391 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 AP1B1Q10567 949 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CBWD2Q8IUF1 395 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 PPIL6Q8IXY8 311 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 FAM71DQ8N9W8 422 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 PCDHA3Q9Y5H8 950 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 ADAMTS3O15072 1205 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 NOL4O94818 638 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 FAM200BP0CF97 657 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 RPA3P35244 121 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 MIS18BP1Q6P0N0 1132 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 PPP2R3CQ969Q6 453 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 ELMO3Q96BJ8 720 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 NRBF2Q96F24 287 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 RMDN2Q96LZ7 410 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 DCLK3Q9C098 648 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 RBAKQ9NYW8 714 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 PCYOX1Q9UHG3 505 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 BTNL10A8MVZ5 291 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 KCNN4O15554 427 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SRGAP2CP0DJJ0 459 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 OSBPP22059 807 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 CHKAP35790 457 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SESN2P58004 480 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-201ENST00000261646 TMPRSS6Q8IU80 811 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 RNF217Q8TC41 542 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SPATA18Q8TC71 538 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 GFM2Q969S9 779 aaKnown RBP16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 PDZD4Q76G19 769 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-201ENST00000261646 MCPH1Q8NEM0 835 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 FEZF2Q8TBJ5 459 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 MPP4Q96JB8 637 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 AGAP1Q9UPQ3 857 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 STARD13Q9Y3M8 1113 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 IL1RL1Q01638 556 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 TMA16Q96EY4 203 aaKnown RBP16.98■□□□□ 0.31
SREBF1-201ENST00000261646 TMEM8AQ9HCN3 771 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SAR1AQ9NR31 198 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 NRBP2Q9NSY0 501 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 SLC24A2Q9UI40 661 aa16.98■□□□□ 0.31
SREBF1-201ENST00000261646 BCL9O00512 1426 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 SLC26A4O43511 780 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 DGKIO75912 1065 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 PIAS1O75925 651 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF667Q5HYK9 610 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF720Q7Z2F6 126 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 TLCD1Q96CP7 247 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 POLR3CQ9BUI4 534 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 SLC38A10Q9HBR0 1119 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 AGO2Q9UKV8 859 aaKnown RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 NDUFB10O96000 172 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 LDHAP00338 332 aaKnown RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 PYGBP11216 843 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 CREB1P16220 341 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF572Q7Z3I7 529 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 IL1RAPL1Q9NZN1 696 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 PDE5AO76074 875 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 TFDP1Q14186 410 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 MORF4L2Q15014 288 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 FAM102AQ5T9C2 384 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-201ENST00000261646 FAXCQ5TGI0 409 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 ECHDC2Q86YB7 292 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
SREBF1-201ENST00000261646 GPR75-ASB3A0A0A6YYF3 556 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 PABPN1LA6NDY0 278 aaKnown RBP16.96■□□□□ 0.31
SREBF1-201ENST00000261646 C5orf60A6NFR6 353 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 PRPSAP1Q14558 356 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF699Q32M78 642 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 C6orf89Q6UWU4 347 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 KAT5Q92993 513 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 ETS2P15036 469 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
SREBF1-201ENST00000261646 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms