RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LRRN2O75325 713 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 ERVFC1P60507 584 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 DSG1Q02413 1049 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 SMC1AQ14683 1233 aaKnown RBP22.16■■□□□ 1.14
RTCA-201ENST00000260563 PLPP4Q5VZY2 271 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 TOP6BLQ8N6T0 577 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 ELMO3Q96BJ8 720 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 MMS19Q96T76 1030 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 EDEM3Q9BZQ6 932 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 MRPL17Q9NRX2 175 aaKnown RBP22.16■■□□□ 1.14
RTCA-201ENST00000260563 CEP72Q9P209 647 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 APEX2Q9UBZ4 518 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 FBXL5Q9UKA1 691 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 SSX2IPQ9Y2D8 614 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 C2CD2LO14523 706 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 FSCN2O14926 492 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 UCHL3P15374 230 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 TYMPP19971 482 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 POLR2FP61218 127 aaKnown RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 YWHAHQ04917 246 aaPredicted RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 CAMK1Q14012 370 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 PDE12Q6L8Q7 609 aaKnown RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 PDXDC1Q6P996 788 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 SCARA5Q6ZMJ2 495 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 CACNA2D4Q7Z3S7 1137 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 CNGA4Q8IV77 575 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 MICAL1Q8TDZ2 1067 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 RIN2Q8WYP3 895 aaPredicted RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 NGRNQ9NPE2 291 aaKnown RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 L1RE1Q9UN81 338 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 POLIQ9UNA4 740 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 DAAM1Q9Y4D1 1078 aa22.15■■□□□ 1.14
RTCA-201ENST00000260563 TIMM13Q9Y5L4 95 aaPredicted RBP22.15■■□□□ 1.14
RTCA-201ENST00000260563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 RNF225M0QZC1 329 aaPredicted RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 MFAP3LO75121 409 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 CYP11A1P05108 521 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 IRS1P35568 1242 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 ADKP55263 362 aaKnown RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 GOLGA8FQ08AF8 430 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 GOLGA8DPQ0D2H9 430 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 LRMPQ12912 555 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 PTPN14Q15678 1187 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 VARS2Q5ST30 1063 aaKnown RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 PHLDB3Q6NSJ2 640 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 ANKS3Q6ZW76 656 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 Q7L0L9 218 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 DPH6Q7L8W6 267 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 METTL23Q86XA0 190 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 AUTS2Q8WXX7 1259 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 PIK3R5Q8WYR1 880 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 MRPL38Q96DV4 380 aaKnown RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 NT5C1BQ96P26 610 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 GAS2L1Q99501 681 aaPredicted RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 NIF3L1Q9GZT8 377 aa22.14■■□□□ 1.13
RTCA-201ENST00000260563 APOBEC3GQ9HC16 384 aaKnown RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 LUC7L2Q9Y383 392 aaKnown RBP22.14■■□□□ 1.13
RTCA-201ENST00000260563 PLXNA3P51805 1871 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 RFX1P22670 979 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 CREMQ03060 361 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 ARID5BQ14865 1188 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 PSMD5Q16401 504 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 KIAA0319Q5VV43 1072 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 OVOS1Q6IE37 1185 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 ZNF280DQ6N043 979 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 GPR65Q8IYL9 337 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 ADGRF2Q8IZF7 708 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 TMEM86AQ8N2M4 240 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 PDCL2Q8N4E4 241 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 DEFB123Q8N688 67 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 TC2NQ8N9U0 490 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 ZNF397Q8NF99 534 aaPredicted RBP22.13■■□□□ 1.13
RTCA-201ENST00000260563 NLRC4Q9NPP4 1024 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 FHOD1Q9Y613 1164 aa22.13■■□□□ 1.13
RTCA-201ENST00000260563 KRT9P35527 623 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 ASPAP45381 313 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 ZBED6P86452 979 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 SOWAHAQ2M3V2 549 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 WSCD1Q658N2 575 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 IQCEQ6IPM2 695 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 GJB7Q6PEY0 223 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 PRSS55Q6UWB4 352 aaPredicted RBP22.12■■□□□ 1.13
RTCA-201ENST00000260563 ARHGEF19Q8IW93 802 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 SPATA18Q8TC71 538 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 NAA15Q9BXJ9 866 aaKnown RBP22.12■■□□□ 1.13
RTCA-201ENST00000260563 SMYD3Q9H7B4 428 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.12■■□□□ 1.13
RTCA-201ENST00000260563 LMCD1Q9NZU5 365 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 DNAJC12Q9UKB3 198 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 PCDHGC5Q9Y5F6 944 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 IRAK3Q9Y616 596 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 MYO7AQ13402 2215 aa22.12■■□□□ 1.13
RTCA-201ENST00000260563 H7C4K7 107 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 CXCL14O95715 111 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 LNX1Q8TBB1 728 aaPredicted RBP22.11■■□□□ 1.13
RTCA-201ENST00000260563 BAP1Q92560 729 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 FAXDC2Q96IV6 333 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 ABHD10Q9NUJ1 306 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 AJAP1Q9UKB5 411 aaPredicted RBP22.11■■□□□ 1.13
RTCA-201ENST00000260563 C2orf71A6NGG8 1288 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms