RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FGFR3P22607 806 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 WARSP23381 471 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 DNAJB2P25686 324 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 PLCB3Q01970 1234 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 DDX53Q86TM3 631 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 CEP57Q86XR8 500 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 WHAMMQ8TF30 809 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 TGS1Q96RS0 853 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 LUC7L2Q9Y383 392 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 VWA8A3KMH1 1905 aa16.89■□□□□ 0.29
CCDC90B-201ENST00000260054 FAM163BP0C2L3 166 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 LMO2P25791 158 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 NDST1P52848 882 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ERVK-21P61565 698 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 SMAD3P84022 425 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ZBED6P86452 979 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 RTP2Q5QGT7 225 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 TMEM270Q6UE05 265 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 TMEM86AQ8N2M4 240 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PLVAPQ9BX97 442 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 DSEQ9UL01 958 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 BARX2Q9UMQ3 279 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 CNTN6Q9UQ52 1028 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PCDHB4Q9Y5E5 795 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ARHGEF37A1IGU5 675 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 MFAP3LO75121 409 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 SOD2P04179 222 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 KRT5P13647 590 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 KRT9P35527 623 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 KRT17Q04695 432 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 YWHAHQ04917 246 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ORC1Q13415 861 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 E4F1Q66K89 784 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 OVOS1Q6IE37 1185 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 PDLIM2Q96JY6 352 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 RTP3Q9BQQ7 232 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 TTPALQ9BTX7 342 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 HERC2P3Q9BVR0 1158 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 SNX25Q9H3E2 840 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 FAM124BQ9H5Z6 455 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 CHST7Q9NS84 486 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
CCDC90B-201ENST00000260054 A0A1W2PPC1 479 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 AKR1B15C9JRZ8 316 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 OAZ2O95190 189 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 TPM1P09493 284 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 SOX5P35711 763 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 GNL1P36915 607 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 USP8P40818 1118 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 STAT1P42224 750 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 MRPL58Q14197 206 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 USP41Q3LFD5 358 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 METTL23Q86XA0 190 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 VPS52Q8N1B4 723 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 TTC39CQ8N584 583 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 RBBP8NLQ8NC74 664 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 ZNF397Q8NF99 534 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 SPATA18Q8TC71 538 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 SAMD11Q96NU1 681 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 ELOVL4Q9GZR5 314 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 DPEP3Q9H4B8 488 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
CCDC90B-201ENST00000260054 A8MXQ7 604 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 CYP26A1O43174 497 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 GFPT2O94808 682 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 RB1P06400 928 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 PDGFRBP09619 1106 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 LHX1P48742 406 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 ZNF132P52740 706 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 RAD23BP54727 409 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 KIAA0319Q5VV43 1072 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 UNC93AQ86WB7 457 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 SLC4A11Q8NBS3 891 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 SPPL3Q8TCT6 385 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 TIFAQ96CG3 184 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 C11orf84Q9BUA3 381 aaPredicted RBP16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 ACP6Q9NPH0 428 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 PLXNA4Q9HCM2 1894 aa16.86■□□□□ 0.29
CCDC90B-201ENST00000260054 CALCAP01258 141 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 DNAJB1P25685 340 aa16.85■□□□□ 0.29
CCDC90B-201ENST00000260054 CLCN1P35523 988 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms