RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 IFT20Q8IY31 132 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 SLC30A5Q8TAD4 765 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 CAVIN3Q969G5 261 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 PI4K2AQ9BTU6 479 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 STK33Q9BYT3 514 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 TSPYL2Q9H2G4 693 aaPredicted RBP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 EPB41L5Q9HCM4 733 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 CACNG4Q9UBN1 327 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 ESYT3A0FGR9 886 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 C9IYK1 514 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 HEXIM1O94992 359 aaKnown RBP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 FGFR1P11362 822 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 GUCY2DQ02846 1103 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 MFSD5Q6N075 450 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 USP37Q86T82 979 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 SEMA4DQ92854 862 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 INTS2Q9H0H0 1204 aaKnown RBP18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM59LQ9UK28 342 aa18.1■□□□□ 0.49
CDKN1A-201ENST00000244741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 CES2O00748 559 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 IL18RAPO95256 599 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 KYAT1Q16773 422 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 KRT39Q6A163 491 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 ALKAL1Q6UXT8 129 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 FTHL17Q9BXU8 183 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 GOLGA2P5Q9HBQ8 144 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 TUBGCP4Q9UGJ1 667 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 NFU1Q9UMS0 254 aa18.09■□□□□ 0.49
CDKN1A-201ENST00000244741 SMIM28A0A1B0GU29 152 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 ARL5CA6NH57 179 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 UPP2O95045 317 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 CST3P01034 146 aaPredicted RBP18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 C4BPAP04003 597 aaKnown RBP18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 KRT19P08727 400 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 GALCP54803 685 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 CLDN10P78369 228 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM132DQ14C87 1099 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 OTOP2Q7RTS6 562 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 SLFN11Q7Z7L1 901 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 WDR49Q8IV35 697 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 GLYCTKQ8IVS8 523 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 TMEM199Q8N511 208 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 GOLGA6L1Q8N7Z2 621 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 IFT81Q8WYA0 676 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 PBKQ96KB5 322 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 INTUQ9ULD6 942 aa18.08■□□□□ 0.49
CDKN1A-201ENST00000244741 ATP8B3O60423 1300 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 CEP104O60308 925 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 VNN1O95497 513 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 POMCP01189 267 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 FAM153BP0C7A2 387 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 GATMP50440 423 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 SCNN1GP51170 649 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 TRADDQ15628 312 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 FAM153CQ494X1 144 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 MRPL10Q7Z7H8 261 aaKnown RBP18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 CASKIN2Q8WXE0 1202 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 FAM153AQ9UHL3 310 aa18.08■□□□□ 0.48
CDKN1A-201ENST00000244741 A0A0A6YYK5 440 aaPredicted RBP18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 PTGESO14684 152 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 RAD51CO43502 376 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ZNF623O75123 536 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 RAB27AP51159 221 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ZACNQ401N2 412 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 SPOPLQ6IQ16 392 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 LEKR1Q6ZMV7 388 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ZNF598Q86UK7 904 aaKnown RBP18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 KLHL7Q8IXQ5 586 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 GSTCDQ8NEC7 633 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 HELQQ8TDG4 1101 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 APBB2Q92870 758 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 SYT11Q9BT88 431 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 TRAIPQ9BWF2 469 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ASB7Q9H672 318 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 RSAD1Q9HA92 442 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 PARNO95453 639 aaKnown RBP18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ITGB3P05106 788 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 PIK3CAP42336 1068 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 NNTQ13423 1086 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 IKBKEQ14164 716 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 PHLDB3Q6NSJ2 640 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 FAM117BQ6P1L5 589 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 C15orf39Q6ZRI6 1047 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 C16orf59Q7L2K0 433 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 ANKRD36BP1Q96IX9 119 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 SH3GL2Q99962 352 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 APEX2Q9UBZ4 518 aa18.07■□□□□ 0.48
CDKN1A-201ENST00000244741 TMCO5BA8MYB1 307 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms