RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 COILP38432 576 aaPredicted RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 STARD8Q92502 1023 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 TMEM161AQ9NX61 479 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 CYGBQ8WWM9 190 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 VCPKMTQ9H867 229 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 THAP1Q9NVV9 213 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 KCNQ3O43525 872 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 GALCP54803 685 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 LBRQ14739 615 aaKnown RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 PTGISQ16647 500 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 SVOPQ8N4V2 548 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 CENPTQ96BT3 561 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 STX7O15400 261 aaKnown RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 TGM3Q08188 693 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 PIGOQ8TEQ8 1089 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 DHX35Q9H5Z1 703 aaKnown RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 PRMT7Q9NVM4 692 aaPredicted RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 STK39Q9UEW8 545 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 FAM153AQ9UHL3 310 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 RPA1P27694 616 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 HOXA13P31271 388 aaPredicted RBP9.4□□□□□ -0.9
LRP1-201ENST00000243077 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 C11orf70Q9BRQ4 267 aa9.4□□□□□ -0.9
LRP1-201ENST00000243077 AKAP10O43572 662 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 CLPTM1O96005 669 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 GH2P01242 217 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 RARBP10826 455 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 SERPINH1P50454 418 aaKnown RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 DOK7Q18PE1 504 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 EXD1Q8NHP7 514 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 TFB1MQ8WVM0 346 aaKnown RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 KIF12Q96FN5 646 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 GINS4Q9BRT9 223 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 C1orf50Q9BV19 199 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 CPDO75976 1380 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 PLEKHA8P1O95397 391 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 ACTN3Q08043 901 aaPredicted RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 CYP4Z1Q86W10 505 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 NPHS2Q9NP85 383 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 URB1O60287 2271 aaKnown RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 IFNGR2P38484 337 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 PHF20Q9BVI0 1012 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 C2orf81A6NN90 581 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L15C9J2P7 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L11C9JVI0 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L18D6R9N7 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L22D6RA61 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L19D6RCP7 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L20D6RJB6 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 TRIM24O15164 1050 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 USP17L24Q0WX57 530 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.91
LRP1-201ENST00000243077 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 ZNF662Q6ZS27 426 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 APOL4Q9BPW4 351 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 TRPC7Q9HCX4 862 aa9.4□□□□□ -0.91
LRP1-201ENST00000243077 CENPXA8MT69 81 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 ARMCX4Q5H9R4 360 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 PLA2G4FQ68DD2 849 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 MICALL2Q8IY33 904 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 CNDP1Q96KN2 507 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 UGGT1Q9NYU2 1555 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 HPCAP84074 193 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 HIST2H2ACQ16777 129 aaPredicted RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 PREPLQ4J6C6 727 aaPredicted RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 IYDQ6PHW0 289 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 NLRP1Q9C000 1473 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 PAX3P23760 479 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 CRKP46108 304 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 CDK16Q00536 496 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 USP10Q14694 798 aaKnown RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 LRCH1Q9Y2L9 728 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 TBKBP1A7MCY6 615 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 H2AFXP16104 143 aaPredicted RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 CCDC103Q8IW40 242 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 CD209Q9NNX6 404 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 ARHGEF38Q9NXL2 777 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 NQO1P15559 274 aaKnown RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 PPARDQ03181 441 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 ACBD5Q5T8D3 534 aaPredicted RBP9.39□□□□□ -0.91
LRP1-201ENST00000243077 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
LRP1-201ENST00000243077 FAM162AQ96A26 154 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms