RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 RSL24D1Q9UHA3 163 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 RASA2Q15283 850 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 TRIM65Q6PJ69 517 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MED26O95402 600 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 KRT20P35900 424 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MREGQ8N565 214 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 WNK4Q96J92 1243 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MRPL4Q9BYD3 311 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 MYO1GB0I1T2 1018 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 GSTT1P30711 240 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 ELF3P78545 371 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 XRCC4Q13426 336 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MDH1BQ5I0G3 518 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 LINC00523Q86TU6 105 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 FAM25AB3EWG3 89 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 FAM25CB3EWG5 89 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 FAM25GB3EWG6 89 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 PTK6Q13882 451 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MXD4Q14582 209 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 MEI1Q5TIA1 1274 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 HMG20AQ9NP66 347 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 ENOPH1Q9UHY7 261 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 USP17L5A8MUK1 530 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 HUS1O60921 280 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 KRT6BP04259 564 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 KRT6CP48668 564 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 RAD23AP54725 363 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 LRRC8DQ7L1W4 858 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 VPS37AQ8NEZ2 397 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 MAP3K14Q99558 947 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 DCP1AQ9NPI6 582 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 UTYO14607 1347 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 NEMP1O14524 444 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 HOXA13P31271 388 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 MTMR1Q13613 665 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 SLC10A5Q5PT55 438 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 PID1Q7Z2X4 250 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 LXNQ9BS40 222 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 IMPAD1Q9NX62 359 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 SMARCAL1Q9NZC9 954 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 UBA2Q9UBT2 640 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 GDPD5Q8WTR4 605 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 OMA1Q96E52 524 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 ARHGEF38Q9NXL2 777 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 SHOC2Q9UQ13 582 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 EVPLLA8MZ36 301 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 OCM2P0CE71 109 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 OCMP0CE72 109 aaPredicted RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 ARMC4Q5T2S8 1044 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 C1orf228Q6PIY5 440 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 TASP1Q9H6P5 420 aa8.57□□□□□ -1.04
APOB-201ENST00000233242 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
APOB-201ENST00000233242 STK4Q13043 487 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 PKN2Q16513 984 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 C11orf63Q6NUN7 778 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 IKBIPQ70UQ0 350 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 EIF2AK1Q9BQI3 630 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 DNALI1O14645 258 aaPredicted RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 PTENP60484 403 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 USP10Q14694 798 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 GLMNQ92990 594 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 LOC100653049A0A140TA62 436 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CFAP99D6REC4 459 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 KRT34O76011 436 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 FDFT1P37268 417 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 HAUS6Q7Z4H7 955 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 TRPM1Q7Z4N2 1603 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 C17orf80Q9BSJ5 609 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CPA2P48052 419 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SLC45A4Q5BKX6 768 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 INPP5FQ9Y2H2 1132 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 UGGT1Q9NYU2 1555 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 OTUD4Q01804 1114 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 IYDQ6PHW0 289 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 WDR60Q8WVS4 1066 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 KCNB2Q92953 911 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 QKIQ96PU8 341 aaKnown RBP eCLIP8.56□□□□□ -1.043e-7■■□□□ 11.5
APOB-201ENST00000233242 CEP44Q9C0F1 390 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 GOLPH3Q9H4A6 298 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 POLD4Q9HCU8 107 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 IL12RB1P42701 662 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 SESN2P58004 480 aaPredicted RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 BOLA3Q53S33 107 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 HSPBP1Q9NZL4 362 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 AGO2Q9UKV8 859 aaKnown RBP8.56□□□□□ -1.04
APOB-201ENST00000233242 C2CD2Q9Y426 696 aa8.56□□□□□ -1.04
APOB-201ENST00000233242 UBXN2AP68543 259 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms