RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HCRTO43612 131 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 RFX1P22670 979 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 DNAJB1P25685 340 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 GLUD2P49448 558 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 PRSS55Q6UWB4 352 aaPredicted RBP29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 ENOSF1Q7L5Y1 443 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 CACNA2D4Q7Z3S7 1137 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 GDPD5Q8WTR4 605 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 AUTS2Q8WXX7 1259 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 FAM81BQ96LP2 452 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 CHST7Q9NS84 486 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 CEP72Q9P209 647 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 HMGXB4Q9UGU5 601 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 EPOPA6NHQ4 379 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 H3BNC9 293 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 URODP06132 367 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 WARSP23381 471 aaKnown RBP29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 CA8P35219 290 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 ZBP1Q9H171 429 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 DDX43Q9NXZ2 648 aaKnown RBP29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 STK39Q9UEW8 545 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 FBXL5Q9UKA1 691 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 LZTS1Q9Y250 596 aa29.12■■■□□ 2.25
CHMP4B-201ENST00000217402 SOX1O00570 391 aaPredicted RBP29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 PNMA6AP0CW24 399 aaPredicted RBP29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 ACO1P21399 889 aaKnown RBP29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 YWHAEP62258 255 aaKnown RBP29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 ORC1Q13415 861 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 DRAP1Q14919 205 aaPredicted RBP29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 UBR7Q8N806 425 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 CPLX3Q8WVH0 158 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 NUP58Q9BVL2 599 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 TTYH3Q9C0H2 523 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 NME7Q9Y5B8 376 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 PCDHB4Q9Y5E5 795 aa29.11■■■□□ 2.25
CHMP4B-201ENST00000217402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.11■■■□□ 2.252e-7■■■□□ 18.5
CHMP4B-201ENST00000217402 KRT5P13647 590 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 ACAT1P24752 427 aaKnown RBP29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 LMO2P25791 158 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 GNL1P36915 607 aaPredicted RBP29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 USP8P40818 1118 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 NDST1P52848 882 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 DSG1Q02413 1049 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 UBE3AQ05086 875 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 INCA1Q0VD86 236 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 ZNF394Q53GI3 561 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 SPAG5Q96R06 1193 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 TCF25Q9BQ70 676 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 STK33Q9BYT3 514 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 ZNF576Q9H609 170 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 ENTPD7Q9NQZ7 604 aa29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 BARX2Q9UMQ3 279 aaPredicted RBP29.1■■■□□ 2.25
CHMP4B-201ENST00000217402 A8MXQ7 604 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 GABRDO14764 452 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 CILPO75339 1184 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 GYPCP04921 128 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 PDGFRBP09619 1106 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 LHX1P48742 406 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 ERVFC1P60507 584 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 CTXN3Q4LDR2 81 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 TMEM270Q6UE05 265 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 TMC7Q7Z402 723 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 GPIHBP1Q8IV16 184 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 DRC7Q8IY82 874 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 SHC3Q92529 594 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 RTP3Q9BQQ7 232 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 GPR88Q9GZN0 384 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 TLR9Q9NR96 1032 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 STXBP5LQ9Y2K9 1186 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 RFXAPO00287 272 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 OAZ2O95190 189 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 PSMD5Q16401 504 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 FIGNQ5HY92 759 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 KIAA0319Q5VV43 1072 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 ZNF280DQ6N043 979 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 ANKS3Q6ZW76 656 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 THEM5Q8N1Q8 247 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 LNX1Q8TBB1 728 aaPredicted RBP29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 PIK3R5Q8WYR1 880 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 JAKMIP2Q96AA8 810 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 TWNKQ96RR1 684 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 MRPL17Q9NRX2 175 aaKnown RBP29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 DAAM1Q9Y4D1 1078 aa29.09■■■□□ 2.25
CHMP4B-201ENST00000217402 F8VZ95 297 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 FOXN3O00409 490 aaPredicted RBP29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 FAM163BP0C2L3 166 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 CTSAP10619 480 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 MRPL58Q14197 206 aaKnown RBP29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 PLPP4Q5VZY2 271 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 OR10T2Q8NGX3 314 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 SPATA18Q8TC71 538 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 DPEP3Q9H4B8 488 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 PCDHGC5Q9Y5F6 944 aa29.08■■■□□ 2.25
CHMP4B-201ENST00000217402 H7C4K7 107 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 RNF225M0QZC1 329 aaPredicted RBP29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 RPL17P18621 184 aaKnown RBP29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 CDC25BP30305 580 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 JAM2P57087 298 aa29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 PSMC1P62191 440 aaKnown RBP29.07■■■□□ 2.24
CHMP4B-201ENST00000217402 PTPN14Q15678 1187 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms