RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mical2Q8BML1 960 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gga1Q8R0H9 635 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Olfr391-psA0A0U1RNJ4 312 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lrrc63A6H694 637 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Dpysl4O35098 572 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Casp14O89094 257 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Aldh1a1P24549 501 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Aldh2P47738 519 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Rnf19aP50636 840 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 GssP51855 474 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Inpp5jP59644 1003 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Top1Q04750 767 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Erich4Q3UNU4 136 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ice2Q3UZ18 988 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Haus1Q8BHX1 278 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tmem220Q8BP07 167 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lrch3Q8BVU0 778 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 ClmnQ8C5W0 1052 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 A430089I19RikQ8C9W1 407 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Zdhhc3Q8R173 299 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Oxct1Q9D0K2 520 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tjp2Q9Z0U1 1167 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mindy4b-psA0A1W2P7H6 457 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Rsrc2A2RTL5 376 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tcp10bE9PYJ0 438 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 PltpP55065 493 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ndst1Q3UHN9 882 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Kiaa0754Q69ZZ9 979 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Dusp11Q6NXK5 321 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 SugctQ7TNE1 436 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Olfr670Q7TRP3 312 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tmem202Q80W35 275 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Unc5bQ8K1S3 945 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 TxlnbQ8VBT1 685 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gys2Q8VCB3 704 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 MiosQ8VE19 875 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ubxn1Q922Y1 297 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 AdarQ99MU3 1178 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 PdclQ9DBX2 301 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tlr6Q9EPW9 795 aa22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Wdr46Q9Z0H1 622 aaKnown RBP22.48■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup10A2BIN1 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup14A2CEK7 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup19A9C497 187 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup15A9R9W0 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup17B5X0G2 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Trim30bE9PVL6 203 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup8E9PVW0 235 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup7E9QA79 235 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm3739L7N296 216 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Adam19O35674 920 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Enc1O35709 589 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup6P02762 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup1P11588 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mup2P11589 180 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Kcnj4P52189 445 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 ChpfQ6IQX7 774 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 GopcQ8BH60 463 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gprc5aQ8BHL4 356 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Wdr11Q8K1X1 1223 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Cpa5Q8R4H4 436 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Cntnap4Q99P47 1310 aa22.47■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 CcnoP0C242 352 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lmnb2P21619 596 aaKnown RBP22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lhx5P61375 402 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Cdr2P97817 455 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Zfp658Q5PPQ4 887 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Amer1Q7TS75 1132 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 GnsQ8BFR4 544 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 PolrmtQ8BKF1 1207 aaKnown RBP22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Pyhin1Q8BV49 420 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ddx50Q99MJ9 734 aaKnown RBP22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gtf2a1Q99PM3 378 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lztr1Q9CQ33 837 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gdap2Q9DBL2 498 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Plxna1P70206 1894 aa22.46■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mroh4G3X8W1 983 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ptp4a2O70274 167 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 AlbP07724 608 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ercc5P35689 1170 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lman2lP59481 347 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Il1rapl1P59823 695 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ect2Q07139 913 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 ItpripQ3TNL8 555 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Nlrc4Q3UP24 1024 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ttf2Q5NC05 1138 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 OgdhQ60597 1023 aaKnown RBP22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ugt1a9Q62452 528 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Q80ZQ3 298 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 DcakdQ8BHC4 231 aaKnown RBP22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Fam78aQ8C552 283 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 H6pdQ8CFX1 789 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Them5Q9CQJ0 248 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 MicalclQ9D5U9 680 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Doc2gQ9ESN1 387 aa22.45■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm45713A0A1B0GS68 446 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm14525B1AZA0 212 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm2012B1B0R1 212 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Myo1eE9Q634 1107 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tubb4bP68372 445 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms