RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 St3gal1P54751 337 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Neurl1bQ0MW30 546 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 GsapQ3TCV3 858 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Psen2Q61144 448 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lsm8Q6ZWM4 96 aaKnown RBP13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Vat1lQ80TB8 417 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ciapin1Q8WTY4 309 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pgm1Q9D0F9 562 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cdca7Q9D0M2 382 aa13.6□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zscan4-ps1A0A1C7CYV3 506 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mageb2A2AHM0 380 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Itpripl1A2ASA8 547 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zscan4dA7KBS4 506 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 AunipE9Q6Z5 340 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Anxa8O35640 327 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 CflarO35732 481 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Banf1O54962 89 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ptk2P34152 1090 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Wnt10bP48614 389 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nrp1P97333 923 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ankmy2Q3TPE9 440 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mylk3Q3UIZ8 795 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zscan4fQ3URS2 506 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Hbs1lQ69ZS7 682 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Orai3Q6P8G8 290 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Glra2Q7TNC8 452 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zscan4cQ80VJ6 506 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lonp1Q8CGK3 949 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tspan8Q8R3G9 235 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dnajc9Q91WN1 259 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Bzw1Q9CQC6 419 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ssu72Q9CY97 194 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ddx56Q9D0R4 546 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ly6iQ9WU67 134 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gadd45gQ9Z111 159 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mzf1S4R1L6 814 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup10A2BIN1 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup14A2CEK7 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup19A9C497 187 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup15A9R9W0 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup17B5X0G2 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup8E9PVW0 235 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup7E9QA79 235 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dusp8O09112 663 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Art2bO35975 289 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ppargc1aO70343 797 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pde4aO89084 844 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup6P02762 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Myl1P05977 188 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup1P11588 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mup2P11589 180 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cdca2Q14B71 982 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tgfbrap1Q3UR70 860 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ifnl2Q4VK74 193 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gstt2Q61133 244 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dpysl3Q62188 570 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 March4Q80TE3 409 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ddhd1Q80YA3 547 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Man2a2Q8BRK9 1152 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ptrh1Q8BW00 204 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Bri3bpQ8BXV2 253 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tor1aip2Q8BYU6 502 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Taf2Q8C176 1104 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Trim68Q8K243 485 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Sec63Q8VHE0 760 aaKnown RBP13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nrbp2Q91V36 499 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cd248Q91V98 765 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pcdha9Q91Y11 979 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cep83Q9D5R3 692 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 1700013H16RikQ9DAC5 291 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 PorcnQ9JJJ7 461 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cyth1Q9QX11 398 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 XkQ9QXY7 446 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Bub1bQ9Z1S0 1052 aa13.59□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zfp612A0A1D5RMC2 672 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 AspgA0JNU3 564 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zfp651E9PZ11 729 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zfp715G3X9T1 886 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dpysl4O35098 572 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rtn2O70622 471 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 ThbdP15306 577 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 PhbP67778 272 aaKnown RBP13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cyp2j11Q3UNV2 504 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ccdc160Q3UYG1 323 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ppp4r3cQ3V0Y1 813 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Syn2Q64332 586 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Znf507Q6ZPY5 941 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Siglec10Q80ZE3 688 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Frmd4aQ8BIE6 1020 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Trpa1Q8BLA8 1125 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nlrp4aQ8BU40 982 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 OafQ8QZR4 282 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Snap47Q8R570 413 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pcdha3Q91Y16 942 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dnajc3Q91YW3 504 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tsc1Q9EP53 1161 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 SerhlQ9EPB5 311 aa13.58□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cntnap4Q99P47 1310 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Serpinb3aG3X9V8 387 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Impa1O55023 277 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms