RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Tmem209Q8BRG8 561 aaKnown RBP13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Leng9Q8BTN6 485 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Rhpn2Q8BWR8 686 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tgif2Q8C0Y1 237 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Leg1Q8C6C9 337 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zfp202Q8C879 641 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tmx1Q8VBT0 278 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ccar2Q8VDP4 922 aaKnown RBP13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Olfr1353Q8VGU8 309 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zdhhc7Q91WU6 308 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Dlg2Q91XM9 852 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 MrgpreQ91ZB7 310 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Smarcd2Q99JR8 531 aaKnown RBP13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Brms1Q99N20 246 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ogfod3Q9D136 315 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Mrpl14Q9D1I6 145 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Q9D454 513 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gstt4Q9D4P7 240 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Sema4fQ9Z123 777 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Wisp1O54775 367 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Trappc3O55013 180 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tp53P02340 387 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gnat1P20612 350 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tnnt2P50752 301 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Aldh1a2Q62148 518 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tatdn1Q6P8M1 295 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gucy2gQ6TL19 1100 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Arhgap10Q6Y5D8 786 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 March6Q6ZQ89 909 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Olfr1105Q7TR58 312 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cct8l1Q80YT3 562 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 AgmoQ8BS35 447 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Bend7Q8BSV3 434 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Lig4Q8BTF7 911 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Osbpl6Q8BXR9 959 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ttc24Q8BYG0 334 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gga1Q8R0H9 635 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Lrrc14Q8VC16 493 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Olfr385Q8VGT1 312 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tor1aip1Q921T2 595 aaKnown RBP13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tmem132aQ922P8 1018 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Yaf2Q99LW6 179 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cpxm2Q9D2L5 764 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tspan3Q9QY33 253 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Dnajb1Q9QYJ3 340 aaKnown RBP13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Igbp1bQ9QZ29 343 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Trpv2Q9WTR1 756 aa13.11□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Alpk2Q91ZB0 2144 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ism1A2ATD1 454 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Kansl3A2RSY1 903 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Wdr72D3YYM4 1114 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tpm3-rs7D3Z2H9 248 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zscan29E9Q5B4 869 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tnfrsf11aO35305 625 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ybx1P62960 322 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ntsr2P70310 416 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Fubp3Q3TIX6 575 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Frmd8Q3UFK8 466 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ksr1Q61097 873 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Mapre1Q61166 268 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pank4Q80YV4 820 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Depdc1bQ8BH88 529 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gpatch3Q8BIY1 525 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 EmsyQ8BMB0 1264 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pyhin1Q8BV49 420 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 NemfQ8CCP0 1064 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Nmrk1Q91W63 195 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Sh3d19Q91X43 789 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Afg3l1Q920A7 789 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 CalcbQ99MP3 130 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Mms19Q9D071 1031 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 PtmsQ9D0J8 101 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Kbtbd12Q9D618 625 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Rnf138rt1Q9D9M9 248 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 JmyQ9QXM1 983 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pdzd4Q9QY39 772 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Prmt2Q9R144 448 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Noc2lQ9WV70 747 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cacna1gQ5SUF7 2381 aa13.1□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 CenpfE9Q3P4 2997 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 SpaarA0A1B0GSZ0 75 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Acp4D3YTS9 425 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tnk2O54967 1055 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ly6aP05533 134 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Rpl10aP53026 217 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ddx6P54823 483 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Srbd1Q497V5 1015 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cntn2Q61330 1040 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cyp3a16Q64481 504 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Q6GQV0 436 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cep120Q7TSG1 988 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Aste1Q8BIR2 672 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Nipal1Q8BMW7 416 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Lancl3Q8CD19 420 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Mfsd14bQ8CIA9 507 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Traf3ip2Q8N7N6 555 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Eps8l1Q8R5F8 716 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zdhhc5Q8VDZ4 715 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ndufs2Q91WD5 463 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 HgsQ99LI8 775 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms