RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmem247Q497K7 211 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ankrd13bQ5F259 626 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tdrd5Q5VCS6 1040 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Sh3rf1Q69ZI1 892 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tas2r109Q7M707 316 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Rhot1Q8BG51 631 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 TxlngQ8BHN1 524 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 StgQ8BM15 349 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 TbcdQ8BYA0 1196 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Sf3b4Q8QZY9 424 aaKnown RBP10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 ClyblQ8R4N0 338 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Q91Z58 1206 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Wbp11Q923D5 641 aaKnown RBP10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ndufb9Q9CQJ8 179 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Dhrs7Q9CXR1 338 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 ParvbQ9ES46 365 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Rtn3Q9ES97 964 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tjp1P39447 1745 aaKnown RBP10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 A0A1Y7VP24 259 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Osbpl8B9EJ86 889 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Herc6F2Z461 1003 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kifc3O35231 824 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Drd4P51436 387 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sult2a1P52843 285 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bcl2l13P59017 434 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Stx2Q00262 289 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rab42Q0PD08 215 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 InscQ3HNM7 579 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rapgef1Q3UHC1 1224 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lsg1Q3UM18 644 aaKnown RBP10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tcf4Q60722 670 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lpcat4Q6NVG1 524 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam160b2Q80YR2 744 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rnf38Q8BI21 518 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 AcppQ8CE08 381 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Abcg4Q91WA9 646 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tcaf2Q921K8 919 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dcun1d1Q9QZ73 259 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slfn14V9GXG1 899 aa10.21□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Zscan4-ps3A0A1B0GRH6 506 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Zscan4-ps2A0A1C7CYU6 506 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 FancfE9Q5Z5 343 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gm21962L7N280 338 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Exoc7O35250 697 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc2a7P0C6A1 513 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Serpinc1P32261 465 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tsg101Q61187 391 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trmt13Q8BYH3 481 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ddx19bQ8BZY3 494 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Galnt5Q8C102 930 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam204aQ8C6C7 236 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Vps37aQ8CHS8 397 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mill1Q8HWE7 395 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Olfr815Q8VFU0 316 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Eaf2Q91ZD6 262 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cd209dQ91ZW8 237 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc5a2Q923I7 670 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tcf19Q99KJ5 263 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gadd45gip1Q9CR59 222 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ssu72Q9CY97 194 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Armc1Q9D7A8 282 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cetn2Q9R1K9 172 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tagln3Q9R1Q8 199 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Vmn2r103E9PWW0 856 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Serpina1aP07758 413 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mcpt4P21812 246 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 AdssP46664 456 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PhexP70669 749 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tcerg1lQ3B807 590 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc9b2Q5BKR2 547 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ccdc189Q6NZQ0 333 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dync1li2Q6PDL0 492 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ppp2r5dQ91V89 594 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tom1l1Q923U0 474 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ift22Q9DAI2 185 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tgm1Q9JLF6 815 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Apobec2Q9WV35 224 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Shcbp1Q9Z179 668 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc22a4Q9Z306 553 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mast3Q3U214 1321 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Btbd35f21A0A140T8Q5 498 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mmrn2A6H6E2 943 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gm20721E9Q2U8 318 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Btbd35f22J3QN64 498 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 DldO08749 509 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Man1a2P39098 641 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Foxp2P58463 714 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Caprin2Q05A80 1031 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tbc1d9bQ5SVR0 1263 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PrkciQ62074 595 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rundc3bQ6PDC0 408 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dclk2Q6PGN3 756 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Olfr297Q7TS07 310 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tbx10Q810F8 385 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Zhx2Q8C0C0 836 aaKnown RBP10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tmem246Q91YV9 403 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tceal1Q921P9 165 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ergic3Q9CQE7 383 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Clic3Q9D7P7 237 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PalmdQ9JHU2 551 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms