RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 ITGA4P13612 1032 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 HSPA6P17066 643 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
PHGDH-209ENST00000641074 SOX4Q06945 474 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-209ENST00000641074 DSC3Q14574 896 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 NAA35Q5VZE5 725 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 TRAF7Q6Q0C0 670 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 LRRC52Q8N7C0 313 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 MNS1Q8NEH6 495 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 TFAP2BQ92481 460 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 MMS19Q96T76 1030 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 GOLPH3Q9H4A6 298 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 SQORQ9Y6N5 450 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 SCN1AP35498 2009 aa19.45■□□□□ 0.7
PHGDH-209ENST00000641074 PIRO00625 290 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 PTGESO14684 152 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 XPOTO43592 962 aaKnown RBP19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CILPO75339 1184 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 RAD23BP54727 409 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CENPCQ03188 943 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 TCEAL1Q15170 157 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 MEI1Q5TIA1 1274 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 RHOT2Q8IXI1 618 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 HACE1Q8IYU2 909 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 USP38Q8NB14 1042 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 LPPQ93052 612 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 TWNKQ96RR1 684 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 HMGXB4Q9UGU5 601 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CHORDC1Q9UHD1 332 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-209ENST00000641074 ATMINO43313 823 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CYP1A2P05177 515 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CCL5P13501 91 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 PRLRP16471 622 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CYP3A5P20815 502 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CDK7P50613 346 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 NOMO3P69849 1222 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 ORC1Q13415 861 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 MRPL10Q7Z7H8 261 aaKnown RBP19.44■□□□□ 0.7
PHGDH-209ENST00000641074 SLFN11Q7Z7L1 901 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 ZNF653Q96CK0 615 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 TRAIPQ9BWF2 469 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 ELOVL4Q9GZR5 314 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 RNF208Q9H0X6 261 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 GOLGA2P5Q9HBQ8 144 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 CTTNBP2NLQ9P2B4 639 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 GTF3C4Q9UKN8 822 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 SNX9Q9Y5X1 595 aa19.44■□□□□ 0.7
PHGDH-209ENST00000641074 ZNF185O15231 689 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 BUB1BO60566 1050 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 PAEPP09466 180 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 MLH1P40692 756 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 NSFP46459 744 aaKnown RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 HADHBP55084 474 aaKnown RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 INCA1Q0VD86 236 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 MBTPS1Q14703 1052 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 NAA30Q147X3 362 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 MCOLN2Q8IZK6 566 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 SLC4A11Q8NBS3 891 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 GSTCDQ8NEC7 633 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 PPP1R10Q96QC0 940 aaKnown RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 GAD1Q99259 594 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 ADAM2Q99965 735 aa19.43■□□□□ 0.7
PHGDH-209ENST00000641074 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 PACSIN2Q9UNF0 486 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 V9GYY5 206 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-209ENST00000641074 ZNF623O75123 536 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 AGMOQ6ZNB7 445 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 DAAM2Q86T65 1068 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 TMEM176AQ96HP8 235 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 OSBPL9Q96SU4 736 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 PSMB7Q99436 277 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 FAM124BQ9H5Z6 455 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-209ENST00000641074 CNOT8Q9UFF9 292 aaKnown RBP19.42■□□□□ 0.7
PHGDH-209ENST00000641074 OGDHLQ9ULD0 1010 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 BARX2Q9UMQ3 279 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-209ENST00000641074 PCDHGC3Q9UN70 934 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 HYOU1Q9Y4L1 999 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 A0A0U1RQF3 1178 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 TADA3O75528 432 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 CD19P15391 556 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 ATF7P17544 494 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-209ENST00000641074 RAB27AP51159 221 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
PHGDH-209ENST00000641074 NDST1P52848 882 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 MON1BQ7L1V2 547 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 SYCE1Q8N0S2 351 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 CEP112Q8N8E3 955 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 COG1Q8WTW3 980 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 GIT1Q9Y2X7 761 aa19.42■□□□□ 0.7
PHGDH-209ENST00000641074 SPTLC1O15269 473 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 MTA2O94776 668 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 TCP1P17987 556 aaKnown RBP19.41■□□□□ 0.7
PHGDH-209ENST00000641074 CXCR5P32302 372 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 PTPROQ16827 1216 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 C2CD6Q53TS8 623 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 PHF13Q86YI8 300 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-209ENST00000641074 FAM126BQ8IXS8 530 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 TTC39CQ8N584 583 aa19.41■□□□□ 0.7
PHGDH-209ENST00000641074 CAPZA3Q96KX2 299 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms