RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ANAPC7Q9UJX3 599 aa16.08■□□□□ 0.16
TRIM3-215ENST00000639856 H0YGN5 161 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CXCL8P10145 99 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 DRG2P55039 364 aaKnown RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 SKOR1P84550 965 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CENPCQ03188 943 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 NCOA4Q13772 614 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MFSD10Q14728 455 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 FAM187BQ17R55 369 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 KCTD16Q68DU8 428 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 ZDHHC14Q8IZN3 488 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 TMEM130Q8N3G9 435 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CPA5Q8WXQ8 436 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MAGOHBQ96A72 148 aaKnown RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 C18orf8Q96DM3 657 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 FMO2Q99518 471 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 TRIM31Q9BZY9 425 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 NFS1Q9Y697 457 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 ZEB2O60315 1214 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MYL3P08590 195 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CLTAP09496 248 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 TBXAS1P24557 533 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 PTGIRP43119 386 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 PSMC4P43686 418 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 NOP14P78316 857 aaKnown RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CAP1Q01518 475 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CYP1B1Q16678 543 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 RUFY4Q6ZNE9 571 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 SLC13A5Q86YT5 568 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-215ENST00000639856 SH2D3CQ8N5H7 860 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 ATP6V1G3Q96LB4 118 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CAPS2Q9BXY5 557 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 CNTN6Q9UQ52 1028 aa16.07■□□□□ 0.16
TRIM3-215ENST00000639856 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 RRM1P23921 792 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 IRAK1P51617 712 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 CYFIP2Q96F07 1278 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 PLVAPQ9BX97 442 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 PCDHB4Q9Y5E5 795 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 DNAH12Q6ZR08 3092 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 NRCAMQ92823 1304 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 RRN3P2A6NIE6 340 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 A6NNZ2 444 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 PODXLO00592 558 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TSPAN1O60635 241 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 AOC2O75106 756 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 AP3M2P53677 418 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 ZNF200P98182 395 aaPredicted RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 DHX9Q08211 1270 aaKnown RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TUBB8Q3ZCM7 444 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 DNAJC21Q5F1R6 531 aaKnown RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 CCDC137Q6PK04 289 aaKnown RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TMEM270Q6UE05 265 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 UBLCP1Q8WVY7 318 aaPredicted RBP16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TRIB2Q92519 343 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 AP5M1Q9H0R1 490 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 ZDHHC18Q9NUE0 388 aa16.06■□□□□ 0.16
TRIM3-215ENST00000639856 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 GOLGA6L10A6NI86 522 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 GNA15P30679 374 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 PSEN2P49810 448 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 CPT1AP50416 773 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 MYL6P60660 151 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 LACTBP83111 547 aaPredicted RBP16.05■□□□□ 0.16
TRIM3-215ENST00000639856 SIX1Q15475 284 aaPredicted RBP16.05■□□□□ 0.16
TRIM3-215ENST00000639856 SPDYCQ5MJ68 293 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 TTC27Q6P3X3 843 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 HHIPL1Q96JK4 782 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 RUNDC3BQ96NL0 473 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 IMPG2Q9BZV3 1241 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
TRIM3-215ENST00000639856 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
TRIM3-215ENST00000639856 HAS3O00219 553 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 PPFIA2O75334 1257 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 ERLIN2O94905 339 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 SLC1A1P43005 524 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 FCGRTP55899 365 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 NOMO3P69849 1222 aa16.04■□□□□ 0.16
TRIM3-215ENST00000639856 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms