RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 CEBPBP17676 345 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 PNPLA4P41247 253 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 CASP5P51878 434 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 EPHA5P54756 1037 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 PRKCQQ04759 706 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 E2F4Q16254 413 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 METTL23Q86XA0 190 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 DTWD2Q8NBA8 298 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 CACTINQ8WUQ7 758 aaKnown RBP16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 ELSPBP1Q96BH3 223 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 PHOX2BQ99453 314 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 KXD1Q9BQD3 176 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 IKZF4Q9H2S9 585 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 MAGEF1Q9HAY2 307 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 FAM86C1Q9NVL1 165 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 CEP72Q9P209 647 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 HSFX1Q9UBD0 423 aa16.81■□□□□ 0.28
PTPRVP-204ENST00000639439 CYB561D2O14569 222 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 EXTL3O43909 919 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 F13A1P00488 732 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 ALDH1A3P47895 512 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 EPHB3P54753 998 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 STARD6P59095 220 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 DUSP4Q13115 394 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 SV2CQ496J9 727 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 EFCAB13Q8IY85 973 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 THEM5Q8N1Q8 247 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 PGLYRP2Q96PD5 576 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 GPR88Q9GZN0 384 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 RBAKQ9NYW8 714 aaPredicted RBP16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 SIT1Q9Y3P8 196 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
PTPRVP-204ENST00000639439 MTMR11A4FU01 709 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 PROB1E7EW31 1015 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 PRPF6O94906 941 aaKnown RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 VNN2O95498 520 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 CCR2P41597 374 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 TFAMQ00059 246 aaKnown RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 MLF2Q15773 248 aaPredicted RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 SLC44A4Q53GD3 710 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 CNNM4Q6P4Q7 775 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 DHX58Q96C10 678 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 ZFP14Q9HCL3 533 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
PTPRVP-204ENST00000639439 ZFHX2Q9C0A1 2572 aaPredicted RBP16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 KPNA7A9QM74 516 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 FGF19O95750 216 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 MYL4P12829 197 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 NBL1P41271 181 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 TUFMP49411 452 aaKnown RBP16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 ASIC1P78348 528 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 HS6ST3Q8IZP7 471 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 GPD1LQ8N335 351 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 ATAD1Q8NBU5 361 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 OR10T2Q8NGX3 314 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 C2orf15Q8WU43 125 aaKnown RBP16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 SMARCD2Q92925 531 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 BORCS6Q96GS4 357 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 ASB16Q96NS5 453 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 FGFBP2Q9BYJ0 223 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 ZCWPW1Q9H0M4 648 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 FAM13BQ9NYF5 915 aa16.78■□□□□ 0.28
PTPRVP-204ENST00000639439 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 KANSL1LA0AUZ9 987 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 MOSPD3O75425 235 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 ME1P48163 572 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 ANGPT1Q15389 498 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 SURF1Q15526 300 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 FAM78AQ5JUQ0 283 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 WSCD1Q658N2 575 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 DNASE1L2Q92874 299 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 E2F7Q96AV8 911 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 TMEM209Q96SK2 561 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 C7orf25Q9BPX7 421 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 CRISPLD1Q9H336 500 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 TRPV4Q9HBA0 871 aa16.77■□□□□ 0.28
PTPRVP-204ENST00000639439 KIAA1586Q9HCI6 787 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms