RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 C1orf21Q9H246 121 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 S100A14Q9HCY8 104 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 DDX18Q9NVP1 670 aaKnown RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 BAZ2AQ9UIF9 1905 aaKnown RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 ATP5BP06576 529 aaKnown RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 CD48P09326 243 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 S100A1P23297 94 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SOX5P35711 763 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 NEK2P51955 445 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 TMED2Q15363 201 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 INAQ16352 499 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 DNAAF5Q86Y56 855 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 FAM186BQ8IYM0 893 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 CEP70Q8NHQ1 597 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 PIGBQ92521 554 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 HSPBAP1Q96EW2 488 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 RFX1P22670 979 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SLC5A2P31639 672 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 KRT17Q04695 432 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 APOFQ13790 326 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 TBCCQ15814 346 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 ULK2Q8IYT8 1036 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SNX29Q8TEQ0 813 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 GRK7Q8WTQ7 553 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 JADE3Q92613 823 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 CD101Q93033 1021 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 VPS11Q9H270 941 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 MAD2L2Q9UI95 211 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 AK5Q9Y6K8 562 aa12.66□□□□□ -0.38
CAPN3-221ENST00000638141 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.66□□□□□ -0.38
CAPN3-221ENST00000638141 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-221ENST00000638141 CAMTA2O94983 1202 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 CHRNB2P17787 502 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 SLC1A5Q15758 541 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF276Q8N554 614 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 SAMD3Q8N6K7 520 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 METTL25Q8N6Q8 603 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 RFWD2Q8NHY2 731 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 CFAP57Q96MR6 1250 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 TTC1Q99614 292 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 MAST2Q6P0Q8 1798 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 FBP2O00757 339 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ADCY3O60266 1144 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 PGM3O95394 542 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 GCAP28676 217 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-221ENST00000638141 NR1H2P55055 460 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 DLG1Q12959 904 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF410Q86VK4 478 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 PYROXD1Q8WU10 500 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 ARHGEF26Q96DR7 871 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 MTBPQ96DY7 904 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 Q9H521 79 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-221ENST00000638141 COG5Q9UP83 839 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
CAPN3-221ENST00000638141 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CAPN14A8MX76 684 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
CAPN3-221ENST00000638141 PDXKO00764 312 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 TNFAIP8O95379 198 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 FGFR1P11362 822 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ZNF12P17014 697 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CA4P22748 312 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 NR2F2P24468 414 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ITGA8P53708 1063 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 NAPAP54920 295 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 KRT81Q14533 505 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CLEC16AQ2KHT3 1053 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ZNF362Q5T0B9 420 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-221ENST00000638141 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ANKS1BQ7Z6G8 1248 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ARL10Q8N8L6 244 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms