RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 WHAMMQ8TF30 809 aa22.53■■□□□ 1.2
CLN8-213ENST00000637156 KPNA7A9QM74 516 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 PARNO95453 639 aaKnown RBP22.52■■□□□ 1.2
CLN8-213ENST00000637156 TNNT1P13805 278 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 CAPN2P17655 700 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 LILRA4P59901 499 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 TNNC1P63316 161 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 ARHGAP29Q52LW3 1261 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 C10orf76Q5T2E6 689 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 APBB2Q92870 758 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 VWCEQ96DN2 955 aa22.52■■□□□ 1.2
CLN8-213ENST00000637156 SEPT11Q9NVA2 429 aaKnown RBP22.52■■□□□ 1.2
CLN8-213ENST00000637156 INPPL1O15357 1258 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 PJA2O43164 708 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
CLN8-213ENST00000637156 ITGB8P26012 769 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 CLCNKBP51801 687 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 KIF5AQ12840 1032 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 SMYD5Q6GMV2 418 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 DEFB128Q7Z7B8 93 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 ZNF606Q8WXB4 792 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 ZSWIM1Q9BR11 485 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 GUCA1BQ9UMX6 200 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 INPP5FQ9Y2H2 1132 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 TET1Q8NFU7 2136 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 TMCO5BA8MYB1 307 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 CILPO75339 1184 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 CFHP08603 1231 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 GNA15P30679 374 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 PNPLA4P41247 253 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 YWHAEP62258 255 aaKnown RBP22.51■■□□□ 1.19
CLN8-213ENST00000637156 SOWAHAQ2M3V2 549 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 TWNKQ96RR1 684 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 PAAF1Q9BRP4 392 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 GDAP2Q9NXN4 497 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 SCN1AP35498 2009 aa22.51■■□□□ 1.19
CLN8-213ENST00000637156 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.5■■□□□ 1.19
CLN8-213ENST00000637156 FAM170AA1A519 330 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 TRIM43BA6NCK2 446 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 TAF6P49848 677 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 RAD23BP54727 409 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 CLLU1OSQ5K130 101 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 ZNF677Q86XU0 584 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 CRIPAKQ8N1N5 446 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 RABGGTAQ92696 567 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 TRIM43Q96BQ3 446 aaPredicted RBP22.5■■□□□ 1.19
CLN8-213ENST00000637156 TMEM161AQ9NX61 479 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 HMGXB4Q9UGU5 601 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 SALL4Q9UJQ4 1053 aa22.5■■□□□ 1.19
CLN8-213ENST00000637156 KRT86O43790 486 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 FGFR1P11362 822 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 ETF1P62495 437 aaKnown RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 INCA1Q0VD86 236 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 UPP1Q16831 310 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 FAM43BQ6ZT52 329 aaPredicted RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 ZNF560Q96MR9 790 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 MRPL45Q9BRJ2 306 aaKnown RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 ISCUQ9H1K1 167 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 ELAC1Q9H777 363 aaKnown RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 BARX2Q9UMQ3 279 aaPredicted RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 PAXBP1Q9Y5B6 917 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 CASTOR2A6NHX0 329 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 GZMAP12544 262 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 ORC1Q13415 861 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 LIMS2Q7Z4I7 341 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 UBE2Q1Q7Z7E8 422 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 SLC4A11Q8NBS3 891 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 C3orf58Q8NDZ4 430 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 TFAP2BQ92481 460 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 ELOVL4Q9GZR5 314 aa22.49■■□□□ 1.19
CLN8-213ENST00000637156 PDCD11Q14690 1871 aaKnown RBP22.49■■□□□ 1.19
CLN8-213ENST00000637156 FANCGO15287 622 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 FTLP02792 175 aaPredicted RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 RPL9P32969 192 aaKnown RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 NDST1P52848 882 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 GALCP54803 685 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 GRIK3Q13003 919 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 DNTTIP2Q5QJE6 756 aaKnown RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 GLB1LQ6UWU2 654 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 FAM124BQ9H5Z6 455 aaPredicted RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 LUC7LQ9NQ29 371 aaKnown RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 PUF60Q9UHX1 559 aaKnown RBP22.48■■□□□ 1.19
CLN8-213ENST00000637156 NME7Q9Y5B8 376 aa22.48■■□□□ 1.19
CLN8-213ENST00000637156 PODXLO00592 558 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 THAP12O43422 761 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 TIMP1P01033 207 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 H2AFZP0C0S5 128 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 UNGP13051 313 aaPredicted RBP22.47■■□□□ 1.19
CLN8-213ENST00000637156 SSTR3P32745 418 aaPredicted RBP22.47■■□□□ 1.19
CLN8-213ENST00000637156 GNG11P61952 73 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 SV2CQ496J9 727 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 SYT10Q6XYQ8 523 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 H2AFVQ71UI9 128 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 CYFIP2Q96F07 1278 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 TMEM176AQ96HP8 235 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 TSGA10Q9BZW7 698 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 PCDH10Q9P2E7 1040 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 PCDHB7Q9Y5E2 793 aa22.47■■□□□ 1.19
CLN8-213ENST00000637156 BRD2P25440 801 aaKnown RBP22.47■■□□□ 1.19
CLN8-213ENST00000637156 TUSC3Q13454 348 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms