RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MYL6P60660 151 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CUL2Q13617 745 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CFAP221Q4G0U5 840 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 MORN1Q5T089 497 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 OLFML2BQ68BL8 750 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 BTBD6Q96KE9 485 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
CLN6-217ENST00000636964 EPN3Q9H201 632 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CDT1Q9H211 546 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
CLN6-217ENST00000636964 MAGEB2O15479 319 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLN6-217ENST00000636964 FAM153BP0C7A2 387 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CD58P19256 250 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 TMOD1P28289 359 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CCNHP51946 323 aaPredicted RBP12.25□□□□□ -0.45
CLN6-217ENST00000636964 PTGISQ16647 500 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 FAM153CQ494X1 144 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 ZNF394Q53GI3 561 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 NT5DC3Q86UY8 548 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 LMBR1Q8WVP7 490 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CPA5Q8WXQ8 436 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 FAM153AQ9UHL3 310 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 PROZP22891 400 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 GPC5P78333 572 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 BEX3Q00994 111 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 IFT88Q13099 833 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 NNTQ13423 1086 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 PDCD2Q16342 344 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 TAX1BP1Q86VP1 789 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 RPGRIP1Q96KN7 1286 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 OSBPL7Q9BZF2 842 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 TPX2Q9ULW0 747 aaKnown RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 NCANO14594 1321 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 KIAA0754O94854 1291 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 KRT19P08727 400 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 ENPEPQ07075 957 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 SCARA5Q6ZMJ2 495 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 CPNE8Q86YQ8 564 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 MMGT1Q8N4V1 131 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 LINC01465Q8N7H1 131 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 CCT8L2Q96SF2 557 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 AMFRQ9UKV5 643 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 KAT6AQ92794 2004 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 EME2A4GXA9 379 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 ZSCAN5CA6NGD5 496 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 CLTAP09496 248 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 HOXC6P09630 235 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 TMEM191BP0C7N4 346 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 ARF4P18085 180 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 ACO1P21399 889 aaKnown RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 MESDQ14696 234 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 E2F5Q15329 346 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 DUOXA2Q1HG44 320 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 CEP85LQ5SZL2 805 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 RNF187Q5TA31 235 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 LLGL2Q6P1M3 1020 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 KDM7AQ6ZMT4 941 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 ENOSF1Q7L5Y1 443 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 SLFN11Q7Z7L1 901 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 KIAA0319LQ8IZA0 1049 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 PRMT7Q9NVM4 692 aaPredicted RBP12.24□□□□□ -0.45
CLN6-217ENST00000636964 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
CLN6-217ENST00000636964 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 TRPC3Q13507 836 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 AMHR2Q16671 573 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 C17orf99Q6UX52 265 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 TLK2Q86UE8 772 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 FUKQ8N0W3 1084 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 AP1M1Q9BXS5 423 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 TNFSF13BQ9Y275 285 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 ZNF865P0CJ78 1059 aaPredicted RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 STAG3L1P0CL83 205 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 GZMAP12544 262 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 CRHR2Q13324 411 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 QPCTQ16769 361 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 CYB5D1Q6P9G0 228 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 NLRP14Q86W24 1093 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 SYCE1Q8N0S2 351 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 IQCKQ8N0W5 287 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 ZNF483Q8TF39 744 aaPredicted RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
CLN6-217ENST00000636964 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 ABT1Q9ULW3 272 aaKnown RBP12.23□□□□□ -0.45
CLN6-217ENST00000636964 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms