RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 YWHAQP27348 245 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 POU1F1P28069 291 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 ARFIP2P53365 341 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 SCFD1Q8WVM8 642 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 PMM1Q92871 262 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 PADI4Q9UM07 663 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 FZD1Q9UP38 647 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 PITPNM2Q9BZ72 1349 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 IL10P22301 178 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 ACTN3Q08043 901 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 CCDC137Q6PK04 289 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 CKMP06732 381 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 TBXAS1P24557 533 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 ACTR2P61160 394 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 SREBF2Q12772 1141 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 PGLYRP2Q96PD5 576 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM60Q9H2L4 133 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 LIMA1Q9UHB6 759 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 STAU1O95793 577 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 GJC2Q5T442 439 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 RAB6BQ9NRW1 208 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 GTF2E2P29084 291 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 P3H1Q32P28 736 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 SARM1Q6SZW1 724 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 KLHL24Q6TFL4 600 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 WNK4Q96J92 1243 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 DBR1Q9UK59 544 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 UTYO14607 1347 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 A0A087WUV0 522 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 KLRC2P26717 231 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 C16orf72Q14CZ0 275 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 KIAA1586Q9HCI6 787 aa18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 NPHP4O75161 1426 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-227ENST00000636549 HAUS5O94927 633 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 ALCAMQ13740 583 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 KLHL38Q2WGJ6 581 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 SNAP47Q5SQN1 464 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 TM6SF1Q9BZW5 370 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 FHOD1Q9Y613 1164 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 RNF103O00237 685 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 H2AFYO75367 372 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 GSSP48637 474 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 THTPAQ9BU02 230 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 PDGFRAP16234 1089 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 GPR1P46091 355 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 B3GALNT2Q8NCR0 500 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 TMEM169Q96HH4 297 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 CLUP10909 449 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 PCYT1AP49585 367 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 CAMK2GQ13555 558 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 CPDO75976 1380 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 TRIM16O95361 564 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 EZH2Q15910 746 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 USP39Q53GS9 565 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 NT5DC3Q86UY8 548 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 KCTD10Q9H3F6 313 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 TUT1Q9H6E5 874 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 MROH7-TTC4A0A0A0MT08 1334 aa18.65■□□□□ 0.58
CACNA1A-227ENST00000636549 MYO1CO00159 1063 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 TBX3O15119 743 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 TBC1D4O60343 1298 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 LONRF1Q17RB8 773 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 CENPPQ6IPU0 288 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 RHOT2Q8IXI1 618 aa18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 SPATS2LQ9NUQ6 558 aaKnown RBP18.64■□□□□ 0.58
CACNA1A-227ENST00000636549 CYP4X1Q8N118 509 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 PSD3Q9NYI0 1048 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF185O15231 689 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 KRT20P35900 424 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 DGKDQ16760 1214 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 ZC2HC1CQ53FD0 456 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 C16orf59Q7L2K0 433 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 GATAD2AQ86YP4 633 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 FLCNQ8NFG4 579 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 RNASEH1O60930 286 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 RDM1Q8NG50 284 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 ATP6V1HQ9UI12 483 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 AP2B1P63010 937 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 UNC13DQ70J99 1090 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 TMEM245Q9H330 911 aa18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 TIMM13Q9Y5L4 95 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 POMCP01189 267 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ITGB3P05106 788 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF177Q13360 481 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 TMC7Q7Z402 723 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 SNF8Q96H20 258 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 GGCXP38435 758 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ZBED6P86452 979 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 VAC14Q08AM6 782 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 DHX40Q8IX18 779 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ZMYM4Q5VZL5 1548 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms