RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SCN1AP35498 2009 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 AMPD3Q01432 767 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 SLC44A4Q53GD3 710 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 MIA3Q5JRA6 1907 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 PRSS36Q5K4E3 855 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 THEM5Q8N1Q8 247 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 LINC00301Q8NCQ3 95 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 CACTINQ8WUQ7 758 aaKnown RBP19.38■□□□□ 0.69
PNKP-225ENST00000636214 SNX21Q969T3 373 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 ELSPBP1Q96BH3 223 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 TCEAL4Q96EI5 215 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 PYM1Q9BRP8 204 aaKnown RBP19.38■□□□□ 0.69
PNKP-225ENST00000636214 FAM213AQ9BRX8 229 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 TMEM206Q9H813 350 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 R3HCC1Q9Y3T6 440 aaKnown RBP19.38■□□□□ 0.69
PNKP-225ENST00000636214 PIRO00625 290 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 DCNP07585 359 aaKnown RBP19.37■□□□□ 0.69
PNKP-225ENST00000636214 GARTP22102 1010 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 PNPLA4P41247 253 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 NBL1P41271 181 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 STARD6P59095 220 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 DUSP4Q13115 394 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 UBXN2BQ14CS0 331 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 SV2CQ496J9 727 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 PJA1Q8NG27 643 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 FOXQ1Q9C009 403 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 TNMDQ9H2S6 317 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 CEP72Q9P209 647 aa19.37■□□□□ 0.69
PNKP-225ENST00000636214 KANSL1LA0AUZ9 987 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 ANO9A1A5B4 782 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 MTMR11A4FU01 709 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 CYB561D2O14569 222 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 PPP6R2O75170 966 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 YEATS4O95619 227 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 ADSSP30520 456 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 TFAMQ00059 246 aaKnown RBP19.36■□□□□ 0.69
PNKP-225ENST00000636214 VEPH1Q14D04 833 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 TAF12Q16514 161 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
PNKP-225ENST00000636214 FRMD5Q7Z6J6 570 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 ITIH5Q86UX2 942 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 HS6ST3Q8IZP7 471 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 FAM200AQ8TCP9 573 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
PNKP-225ENST00000636214 NKD2Q969F2 451 aaPredicted RBP19.36■□□□□ 0.69
PNKP-225ENST00000636214 SAAL1Q96ER3 474 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 BCO2Q9BYV7 579 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 GPR88Q9GZN0 384 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 CUEDC2Q9H467 287 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 BRD9Q9H8M2 597 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 RBAKQ9NYW8 714 aaPredicted RBP19.36■□□□□ 0.69
PNKP-225ENST00000636214 ASB3Q9Y575 518 aa19.36■□□□□ 0.69
PNKP-225ENST00000636214 A0A087X0B3 334 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 PROB1E7EW31 1015 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 SPTLC1O15269 473 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 FGF19O95750 216 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 CYP11A1P05108 521 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 ASIC1P78348 528 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 KCNA1Q09470 495 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 SLC39A12Q504Y0 691 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 FAM78AQ5JUQ0 283 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 TANGO2Q6ICL3 276 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 CENPPQ6IPU0 288 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 BRSK2Q8IWQ3 736 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 IQUBQ8NA54 791 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 ATAD1Q8NBU5 361 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 SMARCD2Q92925 531 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 DHX58Q96C10 678 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 ASB16Q96NS5 453 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 SEPT5Q99719 369 aaPredicted RBP19.35■□□□□ 0.69
PNKP-225ENST00000636214 TRMT61BQ9BVS5 477 aaKnown RBP19.35■□□□□ 0.69
PNKP-225ENST00000636214 STRA6Q9BX79 667 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
PNKP-225ENST00000636214 TFIP11Q9UBB9 837 aaKnown RBP19.35■□□□□ 0.69
PNKP-225ENST00000636214 MRPS17Q9Y2R5 130 aaKnown RBP19.35■□□□□ 0.69
PNKP-225ENST00000636214 FRMD3A2A2Y4 597 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 KPNA7A9QM74 516 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 KIAA0391O15091 583 aaKnown RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 NCAM2O15394 837 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 EXTL3O43909 919 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 CUTAO60888 179 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 PRPF6O94906 941 aaKnown RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 TMEM191BP0C7N4 346 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 CCR2P41597 374 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 TUFMP49411 452 aaKnown RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 CASP5P51878 434 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 EPHA5P54756 1037 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 TSPY1Q01534 308 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 SMARCB1Q12824 385 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 GRM2Q14416 872 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 TEAD2Q15562 447 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 MGAT5BQ3V5L5 792 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 ARHGAP15Q53QZ3 475 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 ZC3H14Q6PJT7 736 aaKnown RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 CRELD2Q6UXH1 353 aaPredicted RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 TPRG1Q6ZUI0 275 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 YAF2Q8IY57 180 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 EFCAB13Q8IY85 973 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 DCP1BQ8IZD4 617 aaKnown RBP19.34■□□□□ 0.69
PNKP-225ENST00000636214 ZSCAN18Q8TBC5 510 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms