RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 GRM3Q14832 879 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 IFIT1BQ5T764 474 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF449Q6P9G9 518 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 TUBA3EQ6PEY2 450 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 C1orf228Q6PIY5 440 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 BRINP3Q76B58 766 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 CHST15Q7LFX5 561 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ADGRE4PQ86SQ3 457 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 RTKN2Q8IZC4 609 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SAMD14Q8IZD0 417 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ACRBPQ8NEB7 543 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 NSUN6Q8TEA1 469 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF483Q8TF39 744 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 CFHR4Q92496 578 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 EXTL1Q92935 676 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ITFG2Q969R8 447 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SH3KBP1Q96B97 665 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SLC7A6OSQ96CW6 309 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 HVCN1Q96D96 273 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 MVB12AQ96EY5 273 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 VMP1Q96GC9 406 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PPM1MQ96MI6 270 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 FAM210AQ96ND0 272 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PLEKHG4BQ96PX9 1271 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 DMRTA2Q96SC8 542 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 CENPOQ9BU64 300 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ADI1Q9BV57 179 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 AP1M1Q9BXS5 423 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 KIAA1683Q9H0B3 1180 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ABCG4Q9H172 646 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 OR10A2Q9H208 303 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 DHX36Q9H2U1 1008 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 C1orf112Q9NSG2 853 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 KLHL11Q9NVR0 708 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 EPS15L1Q9UBC2 864 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SEL1LQ9UBV2 794 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 TRPS1Q9UHF7 1281 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 DDX20Q9UHI6 824 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PHTF1Q9UMS5 762 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 RABL2BQ9UNT1 228 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 DNM3Q9UQ16 869 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SNX5Q9Y5X3 404 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 IKBKGQ9Y6K9 419 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 GPRASP1Q5JY77 1395 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ABHD14A-ACY1A0A1B0GW23 586 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 A6NNZ2 444 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 H3BML4 177 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 MATN2O00339 956 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 CPLX1O14810 134 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PLOD3O60568 738 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 COQ9O75208 318 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 TUSC2O75896 110 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ALDH1A2O94788 518 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ATF7P17544 494 aaPredicted RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 CAPN3P20807 821 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SREBF1P36956 1147 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 KIR2DL3P43628 341 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 MEOX1P50221 254 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 IL10RAQ13651 578 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SMC1AQ14683 1233 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SAFBQ15424 915 aaKnown RBP eCLIP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PTPN14Q15678 1187 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 RNF151Q2KHN1 245 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PGS1Q32NB8 556 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 NBPF8Q3BBV2 869 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 UAP1L1Q3KQV9 507 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 GAGE13Q4V321 117 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PARP10Q53GL7 1025 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 COBLL1Q53SF7 1204 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 HIBCHQ6NVY1 386 aaPredicted RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 Q6ZSN1 163 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 USP30Q70CQ3 517 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 OTUD6AQ7L8S5 288 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 OVCH2Q7RTZ1 564 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 GALNT5Q7Z7M9 940 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 FAM43AQ8N2R8 423 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ARL10Q8N8L6 244 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 NAXEQ8NCW5 288 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 AFAP1L1Q8TED9 768 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 GIMAP1Q8WWP7 306 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 NEU4Q8WWR8 484 aaPredicted RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 DPF2Q92785 391 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 N4BP2L2Q92802 583 aaPredicted RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 HDAC10Q969S8 669 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 C1GALT1C1Q96EU7 318 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 MRGPRX4Q96LA9 322 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 UIMC1Q96RL1 719 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ACO2Q99798 780 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SLX1AQ9BQ83 275 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 EIF2AK1Q9BQI3 630 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 POLR3CQ9BUI4 534 aaPredicted RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PLA2G12BQ9BX93 195 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 MRPL9Q9BYD2 267 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SLC6A15Q9H2J7 730 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 IKZF4Q9H2S9 585 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 C12orf65Q9H3J6 166 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 C14orf93Q9H972 538 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 BCO1Q9HAY6 547 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ALG13Q9NP73 1137 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 NLRC4Q9NPP4 1024 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms