RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CNGA2Q16280 664 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 INTS11Q5TA45 600 aaKnown RBP5.39□□□□□ -1.55
CDRT1-208ENST00000630868 TTC7BQ86TV6 843 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 SH2D3CQ8N5H7 860 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 CDYL2Q8N8U2 506 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 ATG16L2Q8NAA4 619 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 NUP43Q8NFH3 380 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 TRAPPC12Q8WVT3 735 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
CDRT1-208ENST00000630868 JADE2Q9NQC1 790 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 CPNE7Q9UBL6 633 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 WASF3Q9UPY6 502 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 NIP7Q9Y221 180 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDRT1-208ENST00000630868 RAXQ9Y2V3 346 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 PCDHA3Q9Y5H8 950 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 CNTNAP5Q8WYK1 1306 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 ABCC12Q96J65 1359 aa5.39□□□□□ -1.55
CDRT1-208ENST00000630868 NOTOA8MTQ0 251 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CCER2I3L3R5 266 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 ACKR2O00590 384 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 TMEM127O75204 238 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 SKAP2O75563 359 aaPredicted RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 MBD4O95243 580 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CD4P01730 458 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 SNRPA1P09661 255 aaKnown RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 ZGLP1P0C6A0 271 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 TYRP14679 529 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 HTRA4P83105 476 aaPredicted RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 SETQ01105 290 aaPredicted RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 TARDBPQ13148 414 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 G3BP1Q13283 466 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CD276Q5ZPR3 534 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 MILR1Q7Z6M3 343 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 RHOT1Q8IXI2 618 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 C1orf131Q8NDD1 294 aaKnown RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 MSLNLQ96KJ4 702 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CRAMP1Q96RY5 1269 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 STK33Q9BYT3 514 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 AP5M1Q9H0R1 490 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 OSBPL5Q9H0X9 879 aaPredicted RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 VPS33BQ9H267 617 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 RBM12Q9NTZ6 932 aaKnown RBP5.38□□□□□ -1.55
CDRT1-208ENST00000630868 GPRC5DQ9NZD1 345 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 ABCF2Q9UG63 623 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CPA4Q9UI42 421 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 HDAC9Q9UKV0 1011 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 CDHR2Q9BYE9 1310 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 NPC1L1Q9UHC9 1359 aa5.38□□□□□ -1.55
CDRT1-208ENST00000630868 HTTP42858 3142 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 TMEM265A0A087WTH1 108 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 A0A1W2PQ27 194 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 A0A1W2PQ64 194 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 A0A1W2PQC6 194 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 BTBD11A6QL63 1104 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 LGALS16A8MUM7 142 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 ISM1B1AKI9 464 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 ERVV-1B6SEH8 477 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SGTAO43765 313 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PLA2G6O60733 806 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SEC24DO94855 1032 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 THP07101 528 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PRKCAP17252 672 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CAPN3P20807 821 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PTGS1P23219 599 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 EEF1GP26641 437 aaKnown RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SLC6A9P48067 706 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PIP4K2AP48426 406 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 GPR15P49685 360 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SUMO3P55854 103 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SOX10P56693 466 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CXCL9Q07325 125 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PRKG1Q13976 671 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 HLFQ16534 295 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PFKFB4Q16877 469 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 ARL13BQ3SXY8 428 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 ZACNQ401N2 412 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 TMC6Q7Z403 805 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 TBC1D1Q86TI0 1168 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CABP7Q86V35 215 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CCDC89Q8N998 374 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 NETO2Q8NC67 525 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 C3orf20Q8ND61 904 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 NETO1Q8TDF5 533 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 RPGRQ92834 1020 aaKnown RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 CLPTM1LQ96KA5 538 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 PHACTR3Q96KR7 559 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 MRGPRX1Q96LB2 322 aa5.37□□□□□ -1.55
CDRT1-208ENST00000630868 VRK1Q99986 396 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 NOL10Q9BSC4 688 aaKnown RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 SORBS1Q9BX66 1292 aaKnown RBP5.37□□□□□ -1.55
CDRT1-208ENST00000630868 NYXQ9GZU5 481 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms