RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 HKR1P10072 659 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 RARBP10826 455 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TGM1P22735 817 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 GATA3P23771 443 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 AKAP5P24588 427 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 CYP2C19P33261 490 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PLS1Q14651 629 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SF3B3Q15393 1217 aaKnown RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 ABHD17BQ5VST6 288 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SLC30A10Q6XR72 485 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 EPM2AIP1Q7L775 607 aaPredicted RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 CLNKQ7Z7G1 428 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 COL23A1Q86Y22 540 aaPredicted RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 ADGRG5Q8IZF4 528 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 FAM43AQ8N2R8 423 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 CAMKK1Q8N5S9 505 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 AOPEPQ8N6M6 819 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 ZBTB34Q8NCN2 500 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PSD4Q8NDX1 1056 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 JDP2Q8WYK2 163 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 LPIN2Q92539 896 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PTCD3Q96EY7 689 aaKnown RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 BOD1Q96IK1 185 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 NT5C1BQ96P26 610 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TAAR9Q96RI9 348 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 MED15Q96RN5 788 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TRIB1Q96RU8 372 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 AIFM2Q9BRQ8 373 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TINAGL1Q9GZM7 467 aaPredicted RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 MRPL46Q9H2W6 279 aaKnown RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SMOC2Q9H3U7 446 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TOR3AQ9H497 397 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SLITRK6Q9H5Y7 841 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 WDCPQ9H6R7 721 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 KMT5AQ9NQR1 393 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TMEM74BQ9NUR3 256 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 TBCCD1Q9NVR7 557 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SIDT1Q9NXL6 827 aaKnown RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 CFAP97Q9P2B7 532 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PACSIN3Q9UKS6 424 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 PNMA8BQ9ULN7 279 aaPredicted RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 G3BP2Q9UN86 482 aaKnown RBP3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 STXBP5LQ9Y2K9 1186 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 SALL3Q9BXA9 1300 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 KAT6AQ92794 2004 aa3.12□□□□□ -1.91
SCARNA4-201ENST00000629045 E2F8A0AVK6 867 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 MYADML2A6NDP7 307 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 POLRMTO00411 1230 aaKnown RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 MGST3O14880 152 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ARIH2O95376 493 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 FTH1P19P0C7X4 201 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 HDCP19113 662 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 LPOP22079 712 aaPredicted RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 AVPR1BP47901 424 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ANXA11P50995 505 aaKnown RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 NKX6-1P78426 367 aaPredicted RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 PIGFQ07326 219 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 MPP3Q13368 585 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 KIF22Q14807 665 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ATAT1Q5SQI0 421 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 B3GNT9Q6UX72 402 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 Q6ZNX1 250 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 TSHZ1Q6ZSZ6 1077 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 PDSS2Q86YH6 399 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 DENND1CQ8IV53 801 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 COLGALT2Q8IYK4 626 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 SLC30A5Q8TAD4 765 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 KLHDC4Q8TBB5 520 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 SCAMP4Q969E2 229 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 FUBP1Q96AE4 644 aaKnown RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 COQ10AQ96MF6 247 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ACO2Q99798 780 aaKnown RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 SMOQ99835 787 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 LRFN3Q9BTN0 628 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 PRDM13Q9H4Q3 707 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 GPR35Q9HC97 309 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 GNL3LQ9NVN8 582 aaKnown RBP3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 PNPOQ9NVS9 261 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 RLIMQ9NVW2 624 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 KCTD5Q9NXV2 234 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 ETAA1Q9NY74 926 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 C11orf21Q9P2W6 132 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 CPA4Q9UI42 421 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 PCDHA6Q9UN73 950 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 EID1Q9Y6B2 187 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 MAST3O60307 1309 aa3.11□□□□□ -1.91
SCARNA4-201ENST00000629045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 UBXN7O94888 489 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 ESRRBO95718 433 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 LMNAP02545 664 aaKnown RBP3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 ANXA1P04083 346 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 RHOP08100 348 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 PPP3CBP16298 524 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 HSPA6P17066 643 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 VCAM1P19320 739 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 BMP5P22003 454 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 HTR1BP28222 390 aa3.1□□□□□ -1.91
SCARNA4-201ENST00000629045 ADRA1BP35368 520 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms