RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 EZH1Q92800 747 aaPredicted RBP15.26■□□□□ 0.03
SNX1-214ENST00000625244 FAM83CQ9BQN1 747 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 POLR3CQ9BUI4 534 aaPredicted RBP15.26■□□□□ 0.03
SNX1-214ENST00000625244 SLC26A6Q9BXS9 759 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 TPSD1Q9BZJ3 242 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 SMG9Q9H0W8 520 aaKnown RBP15.26■□□□□ 0.03
SNX1-214ENST00000625244 CRISPLD1Q9H336 500 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 MBD1Q9UIS9 605 aaPredicted RBP15.26■□□□□ 0.03
SNX1-214ENST00000625244 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
SNX1-214ENST00000625244 SMIM28A0A1B0GU29 152 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 PODXLO00592 558 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 C1QL1O75973 258 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 GALK1P51570 392 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 RUNX3Q13761 415 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 NTRK3Q16288 839 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 INF2Q27J81 1249 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 ZNF423Q2M1K9 1284 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 ZNF280DQ6N043 979 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 HAS1Q92839 578 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 CRELD1Q96HD1 420 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 ADPGKQ9BRR6 497 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 NUSAP1Q9BXS6 441 aaKnown RBP15.25■□□□□ 0.03
SNX1-214ENST00000625244 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 SCUBE2Q9NQ36 999 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 FSCN3Q9NQT6 498 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 TPCN1Q9ULQ1 816 aa15.25■□□□□ 0.03
SNX1-214ENST00000625244 CPB1P15086 417 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 DRD1P21728 446 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 EPHB3P54753 998 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
SNX1-214ENST00000625244 ZBTB8OSQ8IWT0 167 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 PGLYRP2Q96PD5 576 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 RNF26Q9BY78 433 aaPredicted RBP15.24■□□□□ 0.03
SNX1-214ENST00000625244 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
SNX1-214ENST00000625244 THG1LQ9NWX6 298 aaKnown RBP15.24■□□□□ 0.03
SNX1-214ENST00000625244 A0A087WWV3 80 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 ACKR2O00590 384 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 OR4Q2P0C623 313 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 LIG1P18858 919 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 GABRR2P28476 465 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 WEE1P30291 646 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 RARRES1P49788 294 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 DUSP4Q13115 394 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 PLD1Q13393 1074 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 NPY5RQ15761 445 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
SNX1-214ENST00000625244 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 TSTD1Q8NFU3 115 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 DDX12PQ92771 950 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
SNX1-214ENST00000625244 ANKEF1Q9NU02 776 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 NUB1Q9Y5A7 615 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 TRIP11Q15643 1979 aa15.23■□□□□ 0.03
SNX1-214ENST00000625244 NUP210Q8TEM1 1887 aaPredicted RBP15.23■□□□□ 0.03
SNX1-214ENST00000625244 PI4KAP42356 2102 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 SPTA1P02549 2419 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
SNX1-214ENST00000625244 PLA2G2AP14555 144 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ARSAP15289 507 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 PTGER3P43115 390 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 CYP4F8P98187 520 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 MAPK6Q16659 721 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 FBXO43Q4G163 708 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ARHGAP15Q53QZ3 475 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ANO7Q6IWH7 933 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ARMCX6Q7L4S7 300 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 HDDC3Q8N4P3 179 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 PNPLA1Q8N8W4 532 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 BSNDQ8WZ55 320 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ACDQ96AP0 544 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 SUSD3Q96L08 255 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 P2RY13Q9BPV8 354 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 EIF2AK1Q9BQI3 630 aaKnown RBP15.22■□□□□ 0.03
SNX1-214ENST00000625244 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 SLC27A5Q9Y2P5 690 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 NID2Q14112 1375 aa15.22■□□□□ 0.03
SNX1-214ENST00000625244 PLXNB3Q9ULL4 1909 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 ATMQ13315 3056 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 SOAT2O75908 522 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 LYPLA2O95372 231 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 CPA1P15085 419 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 PSMD2Q13200 908 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
SNX1-214ENST00000625244 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
SNX1-214ENST00000625244 PPP4R3AQ6IN85 833 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms