RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
PMS1-221ENST00000624204 DCCP43146 1447 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 BBOF1Q8ND07 529 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 NMUR2Q9GZQ4 415 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 PPM1HQ9ULR3 514 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 CCDC195A0A1B0GUA6 201 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 KRT5P13647 590 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 ETS1P14921 441 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 BTDP43251 543 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 IRX4P78413 519 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 ALYREFQ86V81 257 aaKnown RBP16.01■□□□□ 0.15
PMS1-221ENST00000624204 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 HAPLN3Q96S86 360 aa16.01■□□□□ 0.15
PMS1-221ENST00000624204 TYROBPO43914 113 aa16■□□□□ 0.15
PMS1-221ENST00000624204 CLK2P49760 499 aaKnown RBP16■□□□□ 0.15
PMS1-221ENST00000624204 CDK16Q00536 496 aa16■□□□□ 0.15
PMS1-221ENST00000624204 PDIA2Q13087 525 aaKnown RBP16■□□□□ 0.15
PMS1-221ENST00000624204 MED21Q13503 144 aa16■□□□□ 0.15
PMS1-221ENST00000624204 EFTUD2Q15029 972 aaKnown RBP eCLIP16■□□□□ 0.15
PMS1-221ENST00000624204 RASA2Q15283 850 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ODR4Q5SWX8 454 aa16■□□□□ 0.15
PMS1-221ENST00000624204 RINT1Q6NUQ1 792 aa16■□□□□ 0.15
PMS1-221ENST00000624204 GLIS1Q8NBF1 620 aa16■□□□□ 0.15
PMS1-221ENST00000624204 CYP2W1Q8TAV3 490 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ZNF148Q9UQR1 794 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ARHGAP42A6NI28 874 aa16■□□□□ 0.15
PMS1-221ENST00000624204 A8MXQ7 604 aa16■□□□□ 0.15
PMS1-221ENST00000624204 PDLIM1O00151 329 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ITGA2BP08514 1039 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ATF7P17544 494 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 MAGEA8P43361 318 aa16■□□□□ 0.15
PMS1-221ENST00000624204 SH2D4BQ5SQS7 431 aa16■□□□□ 0.15
PMS1-221ENST00000624204 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 RAPH1Q70E73 1250 aa16■□□□□ 0.15
PMS1-221ENST00000624204 SCUBE1Q8IWY4 988 aa16■□□□□ 0.15
PMS1-221ENST00000624204 NCSTNQ92542 709 aa16■□□□□ 0.15
PMS1-221ENST00000624204 PARVGQ9HBI0 331 aa16■□□□□ 0.15
PMS1-221ENST00000624204 PSMC3IPQ9P2W1 217 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 PPARGC1AQ9UBK2 798 aaKnown RBP16■□□□□ 0.15
PMS1-221ENST00000624204 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 PENKP01210 267 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 HNRNPCP07910 306 aaKnown RBP eCLIP16■□□□□ 0.15
PMS1-221ENST00000624204 RARBP10826 455 aa16■□□□□ 0.15
PMS1-221ENST00000624204 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
PMS1-221ENST00000624204 SPDYAQ5MJ70 313 aa16■□□□□ 0.15
PMS1-221ENST00000624204 ZNF398Q8TD17 642 aa16■□□□□ 0.15
PMS1-221ENST00000624204 LENG1Q96BZ8 264 aaPredicted RBP16■□□□□ 0.15
PMS1-221ENST00000624204 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
PMS1-221ENST00000624204 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 TAF1P21675 1872 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 CD58P19256 250 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ARL4CP56559 192 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ARHGAP4P98171 946 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 GPS1Q13098 491 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 RASA3Q14644 834 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ZCCHC9Q8N567 271 aaKnown RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 RBM15BQ8NDT2 890 aaKnown RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 MTBPQ96DY7 904 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 FHDC1Q9C0D6 1143 aaPredicted RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 FAM237BA0A1B0GVD1 139 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ASLP04424 464 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 MAGEA10P43363 369 aaPredicted RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 TMEM62Q0P6H9 643 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 PYDC1Q8WXC3 89 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 USP6NLQ92738 828 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 PANX3Q96QZ0 392 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 DDX43Q9NXZ2 648 aaKnown RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 MTMR4Q9NYA4 1195 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 UVRAGQ9P2Y5 699 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 SPATA31A1Q5TZJ5 1347 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 PAPPAQ13219 1627 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ABHD2P08910 425 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 PASD1Q8IV76 773 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 CEP70Q8NHQ1 597 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 OXNAD1Q96HP4 312 aaPredicted RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 OLFML3Q9NRN5 406 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 BLOC1S6Q9UL45 172 aa15.99■□□□□ 0.15
PMS1-221ENST00000624204 MTO1Q9Y2Z2 717 aaKnown RBP15.99■□□□□ 0.15
PMS1-221ENST00000624204 KIAA1551Q9HCM1 1747 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 ZBTB5O15062 677 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 CYP1A2P05177 515 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 GZMAP12544 262 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 NT5C2P49902 561 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 GSTO1P78417 241 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 FMO1Q01740 532 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 LMO3Q8TAP4 145 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 EIF2AK1Q9BQI3 630 aaKnown RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 PACSIN3Q9UKS6 424 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 LAMB1P07942 1786 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms