RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 CD58P19256 250 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 RFC2P35250 354 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 PDE6CP51160 858 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 CDH8P55286 799 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 TNNC1P63316 161 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 FMO1Q01740 532 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 GRIK3Q13003 919 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
FMR1-220ENST00000621987 KIAA1328Q86T90 577 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
FMR1-220ENST00000621987 CRIPAKQ8N1N5 446 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 WHAMMQ8TF30 809 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 VWCEQ96DN2 955 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 PCDHB18PQ96TA0 734 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 LACRTQ9GZZ8 138 aa13.75□□□□□ -0.21
FMR1-220ENST00000621987 CILPO75339 1184 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 CALCAP01258 141 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 MMEP08473 750 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 RPL9P32969 192 aaKnown RBP13.74□□□□□ -0.21
FMR1-220ENST00000621987 TAF6P49848 677 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 LILRA4P59901 499 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 SV2CQ496J9 727 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 PALB2Q86YC2 1186 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 C16orf45Q96MC5 204 aaPredicted RBP13.74□□□□□ -0.21
FMR1-220ENST00000621987 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
FMR1-220ENST00000621987 LZTFL1Q9NQ48 299 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 INTUQ9ULD6 942 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
FMR1-220ENST00000621987 TET1Q8NFU7 2136 aa13.74□□□□□ -0.21
FMR1-220ENST00000621987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
FMR1-220ENST00000621987 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TIMP1P01033 207 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TUBB4AP04350 444 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 PAEPP09466 180 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 GZMAP12544 262 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 GNA15P30679 374 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 RAD23BP54727 409 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TUSC3Q13454 348 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 SOWAHAQ2M3V2 549 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TXLNBQ8N3L3 684 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
FMR1-220ENST00000621987 TSGA10Q9BZW7 698 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 ELOVL4Q9GZR5 314 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
FMR1-220ENST00000621987 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
FMR1-220ENST00000621987 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 KIF2AO00139 706 aaPredicted RBP13.72□□□□□ -0.21
FMR1-220ENST00000621987 PODXLO00592 558 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 KRT86O43790 486 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 TACC1O75410 805 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 POMCP01189 267 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 FAM163BP0C2L3 166 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
FMR1-220ENST00000621987 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.21
FMR1-220ENST00000621987 CLCNKBP51801 687 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 UPP1Q16831 310 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 CLEC16AQ2KHT3 1053 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 CNKSR3Q6P9H4 555 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
FMR1-220ENST00000621987 UROC1Q96N76 676 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 MMS19Q96T76 1030 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 ZSWIM1Q9BR11 485 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 MRPL45Q9BRJ2 306 aaKnown RBP13.72□□□□□ -0.21
FMR1-220ENST00000621987 PACSIN1Q9BY11 444 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 TAS2R14Q9NYV8 317 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 INPP5FQ9Y2H2 1132 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 LTBP2Q14767 1821 aa13.72□□□□□ -0.21
FMR1-220ENST00000621987 KIAA0100Q14667 2235 aaKnown RBP13.72□□□□□ -0.21
FMR1-220ENST00000621987 RTN2O75298 545 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.21
FMR1-220ENST00000621987 H2AFZP0C0S5 128 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 FGFR1P11362 822 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 UNGP13051 313 aaPredicted RBP13.71□□□□□ -0.21
FMR1-220ENST00000621987 TNNT1P13805 278 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
FMR1-220ENST00000621987 PAX3P23760 479 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.21
FMR1-220ENST00000621987 ITGB8P26012 769 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 NDST1P52848 882 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.21
FMR1-220ENST00000621987 DSC1Q08554 894 aa13.71□□□□□ -0.21
FMR1-220ENST00000621987 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms