RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GUCY1A2P33402 732 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RGS4P49798 205 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 SESN2P58004 480 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 CDCA5Q96FF9 252 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RPRD1AQ96P16 312 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 TRAIPQ9BWF2 469 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 PLA2G4CQ9UP65 541 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 PKP3Q9Y446 797 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 F5H5T6 163 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 H3BRB1 525 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 XYLBO75191 536 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 ASS1P00966 412 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RAB27AP51159 221 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 PDIA2Q13087 525 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 PDCD2Q16342 344 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RFFLQ8WZ73 363 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 LRRC37BQ96QE4 947 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 TRIM55Q9BYV6 548 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 TRIM9Q9C026 710 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 TUT1Q9H6E5 874 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 CHST12Q9NRB3 414 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 TPX2Q9ULW0 747 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 GRAP2O75791 330 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ETFBP38117 255 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 SPARCL1Q14515 664 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PCSK7Q16549 785 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 IRAK1BP1Q5VVH5 260 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MIB1Q86YT6 1006 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MTBPQ96DY7 904 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MAP3K14Q99558 947 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 FAM129AQ9BZQ8 928 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 FKTNO75072 461 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 AP1G2O75843 785 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 HOXC6P09630 235 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 WEE2P0C1S8 567 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 VCLP18206 1134 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 KLRK1P26718 216 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 NT5DC4Q86YG4 428 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ATP11CQ8NB49 1132 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 KRT35Q92764 455 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MRPL9Q9BYD2 267 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CIPCQ9C0C6 399 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 SENP6Q9GZR1 1112 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ABHD16BQ9H3Z7 469 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 TRIM33Q9UPN9 1127 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 RASA4BC9J798 803 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 RASA4O43374 803 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ESRRAP11474 423 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CKBP12277 381 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 RPA1P27694 616 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PLD1Q13393 1074 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 DDI1Q8WTU0 396 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 DPF2Q92785 391 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 WDR24Q96S15 920 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CYP4F11Q9HBI6 524 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 TXLNGQ9NUQ3 528 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CRLS1Q9UJA2 301 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 TMX2Q9Y320 296 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PPP3CCP48454 512 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PPATQ06203 517 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 NFE2Q16621 373 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 UGP2Q16851 508 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CES5AQ6NT32 575 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MYPNQ86TC9 1320 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ZBED8Q8IZ13 594 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 TSPAN17Q96FV3 270 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 BTBD6Q96KE9 485 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 GIMAP4Q9NUV9 329 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 FGFR1OP2Q9NVK5 253 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ADCY3O60266 1144 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 VTNP04004 478 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 ATP1A1P05023 1023 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CYP11B2P19099 503 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 FMO5P49326 533 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PIGHQ14442 188 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PDK1Q15118 436 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PREPLQ4J6C6 727 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CSGALNACT1Q8TDX6 532 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CPA5Q8WXQ8 436 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 DNAJC7Q99615 494 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 MAN1C1Q9NR34 630 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 RAB23Q9ULC3 237 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 PLAAQ9Y263 795 aa10.26□□□□□ -0.77
CLTCL1-211ENST00000621271 CYB561D2O14569 222 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CYP2C8P10632 490 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms