RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 DCTPP1Q9H773 170 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 PRDM11Q9NQV5 511 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 OBP2AQ9NY56 170 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 GABBR1Q9UBS5 961 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.26□□□□□ -1.57
SEM1-220ENST00000619259 RUVBL1Q9Y265 456 aaKnown RBP5.26□□□□□ -1.57
SEM1-220ENST00000619259 SIK3Q9Y2K2 1263 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 PCDHB1Q9Y5F3 818 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 STRCP1A6NGW2 1772 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 COL18A1P39060 1754 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 CRYBG1Q9Y4K1 1723 aa5.26□□□□□ -1.57
SEM1-220ENST00000619259 NPHP3Q7Z494 1330 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 TNS3Q68CZ2 1445 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 GPR32O75388 356 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 IL2RBP14784 551 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 DDCP20711 480 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 EPHB4P54760 987 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 ADAM8P78325 824 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 GRM7Q14831 915 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 KRT24Q2M2I5 525 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 KHDC1Q4VXA5 237 aaKnown RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 PLEKHO1Q53GL0 409 aaPredicted RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 CCDC30Q5VVM6 783 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 FAM111BQ6SJ93 734 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 GLB1LQ6UWU2 654 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 B3GNT9Q6UX72 402 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 GPR135Q8IZ08 494 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 SH2D3CQ8N5H7 860 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 LILRA3Q8N6C8 439 aaPredicted RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 PPP1R35Q8TAP8 253 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 HOXB13Q92826 284 aaPredicted RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 VRK1Q99986 396 aaPredicted RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 PLA2G12BQ9BX93 195 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 NELFAQ9H3P2 528 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 AGO3Q9H9G7 860 aaKnown RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 MAN1C1Q9NR34 630 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 C1orf112Q9NSG2 853 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 MOCS1Q9NZB8 636 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 DDX20Q9UHI6 824 aaKnown RBP5.25□□□□□ -1.57
SEM1-220ENST00000619259 HDAC5Q9UQL6 1122 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 MRC1P22897 1456 aa5.25□□□□□ -1.57
SEM1-220ENST00000619259 LRRC14BA6NHZ5 514 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 CAND2O75155 1236 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 STC2O76061 302 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 ALDH2P05091 517 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 KRT18P05783 430 aaKnown RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 TBX4P57082 545 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 EIF4A1P60842 406 aaKnown RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 DSC2Q02487 901 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 CREMQ03060 361 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 PTH1RQ03431 593 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 TARDBPQ13148 414 aaKnown RBP eCLIP5.24□□□□□ -1.578e-6■□□□□ 8.2
SEM1-220ENST00000619259 GRM3Q14832 879 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 LLGL1Q15334 1064 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 ATP2B3Q16720 1220 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 FAM214AQ32MH5 1076 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 FKBP15Q5T1M5 1219 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 CEP85Q6P2H3 762 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 KSR2Q6VAB6 950 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 KRT28Q7Z3Y7 464 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 DENND1CQ8IV53 801 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 ZGPATQ8N5A5 531 aaKnown RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 C3orf20Q8ND61 904 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 RELTQ969Z4 430 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 CGRRF1Q99675 332 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 STK31Q9BXU1 1019 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 XYLT2Q9H1B5 865 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 ARMT1Q9H993 441 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 UPF2Q9HAU5 1272 aaKnown RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 POLHQ9Y253 713 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 PCDHA3Q9Y5H8 950 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 NR2E3Q9Y5X4 410 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 ACTL7AQ9Y615 435 aa5.24□□□□□ -1.57
SEM1-220ENST00000619259 SIPA1L3O60292 1781 aaPredicted RBP5.24□□□□□ -1.57
SEM1-220ENST00000619259 PMS2P1A4D2B8 440 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 H3BUI4 141 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 RNMTO43148 476 aaKnown RBP5.23□□□□□ -1.57
SEM1-220ENST00000619259 HOXA3O43365 443 aaPredicted RBP5.23□□□□□ -1.57
SEM1-220ENST00000619259 SGTAO43765 313 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 HMMRO75330 724 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 UBXN7O94888 489 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 AMY1AP04745 511 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 GNAI3P08754 354 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 FPR1P21462 350 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 GNALP38405 381 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 MAP2K6P52564 334 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 RAP2BP61225 183 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 MRPL49Q13405 166 aaKnown RBP5.23□□□□□ -1.57
SEM1-220ENST00000619259 TBC1D10BQ4KMP7 808 aaPredicted RBP5.23□□□□□ -1.57
SEM1-220ENST00000619259 FAM47AQ5JRC9 791 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 MFSD14BQ5SR56 506 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 AFMIDQ63HM1 303 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 LIMS2Q7Z4I7 341 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 DAAM2Q86T65 1068 aa5.23□□□□□ -1.57
SEM1-220ENST00000619259 CIR1Q86X95 450 aaPredicted RBP5.23□□□□□ -1.57
SEM1-220ENST00000619259 DGKHQ86XP1 1220 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms