RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 RHOT1Q8IXI2 618 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 TMEM35BQ8NCS4 154 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FMO2Q99518 471 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FDXACB1Q9BRP7 624 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 ABHD16BQ9H3Z7 469 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 PDZD7Q9H5P4 517 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 ASB7Q9H672 318 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 TUT1Q9H6E5 874 aaKnown RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 GBA2Q9HCG7 927 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 AKT3Q9Y243 479 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 TCRBV5S1A1TA0A578 114 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 KRT14P02533 472 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 ZNF286BP0CG31 522 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 STAG3L1P0CL83 205 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 CD58P19256 250 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 OSTNP61366 133 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 GPR162Q16538 588 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 C2CD6Q53TS8 623 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 EMC10Q5UCC4 262 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 KATNAL2Q8IYT4 538 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 IP6K2Q9UHH9 426 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 SIX4Q9UIU6 781 aa16.71■□□□□ 0.27
NR1H3-235ENST00000616973 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TLR3O15455 904 aaKnown RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 SMPD1P17405 629 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 SKOR1P84550 965 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 ZNF667Q5HYK9 610 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 ZDHHC24Q6UX98 284 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 PLEKHH3Q7Z736 793 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TINF2Q9BSI4 451 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TRIM31Q9BZY9 425 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TMEM191CA6NGB0 347 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 A6NNZ2 444 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 HMGB1P1B2RPK0 211 aaPredicted RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 MMP3P08254 477 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 PAEPP09466 180 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 WEE2P0C1S8 567 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 ATICP31939 592 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TAP1Q03518 808 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TUBB8Q3ZCM7 444 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 LEKR1Q6ZMV7 388 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 C2orf69Q8N8R5 385 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 LHX5Q9H2C1 402 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 TMBIM4Q9HC24 238 aa16.7■□□□□ 0.26
NR1H3-235ENST00000616973 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 MEFVO15553 781 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 VTNP04004 478 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 NFICP08651 508 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 SSTR3P32745 418 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 RPL21P46778 160 aaKnown RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 IRF5Q13568 498 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 GRIK4Q16099 956 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 SYDE1Q6ZW31 735 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 ZNF410Q86VK4 478 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 UBLCP1Q8WVY7 318 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 TFAP2BQ92481 460 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 ATP6V1G3Q96LB4 118 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 FAM124BQ9H5Z6 455 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-235ENST00000616973 HOMER3Q9NSC5 361 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 TRIP11Q15643 1979 aa16.69■□□□□ 0.26
NR1H3-235ENST00000616973 MED7O43513 233 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 ECEL1O95672 775 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 TAS2R40P59535 323 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 DGKDQ16760 1214 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 CEP85LQ5SZL2 805 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 MARCH8Q5T0T0 291 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 NT5DC4Q86YG4 428 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 WDTC1Q8N5D0 677 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 EXD1Q8NHP7 514 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 CYP3A43Q9HB55 503 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 POLIQ9UNA4 740 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 TSPAN1O60635 241 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 KRT19P08727 400 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 LACTBP83111 547 aaPredicted RBP16.68■□□□□ 0.26
NR1H3-235ENST00000616973 KLF1Q13351 362 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms