RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SYDE1Q6ZW31 735 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 BRSK2Q8IWQ3 736 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARHGAP24Q8N264 748 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 NME8Q8N427 588 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 NLRP7Q8WX94 980 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRIM55Q9BYV6 548 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ERVK-5Q9HDB9 667 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 F8VP50 259 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 H0Y3Z8 333 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 XPOTO43592 962 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PLA2G6O60733 806 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 GRAP2O75791 330 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 STK10O94804 968 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 APRTP07741 180 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RPSAP08865 295 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 TCF7P36402 384 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RPL7AP62424 266 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 IRX4P78413 519 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 C1QBPQ07021 282 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 Q3C1V9 767 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCDC14Q49A88 953 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 BOLA3Q53S33 107 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RCOR2Q8IZ40 523 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PLEKHO2Q8TD55 490 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 HELQQ8TDG4 1101 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PRMT7Q9NVM4 692 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 COG5Q9UP83 839 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 TCRBV7S2A1N4TA0A589 114 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 MAP3K6O95382 1288 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PECAM1P16284 738 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 TNFRSF8P28908 595 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 HNRNPH1P31943 449 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RTP1P59025 263 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 DRP2Q13474 957 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 AUHQ13825 339 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PSMD6Q15008 389 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 METTL7BQ6UX53 244 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PCGF5Q86SE9 256 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CFAP61Q8NHU2 1237 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SREK1Q8WXA9 508 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RNF34Q969K3 372 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ERP27Q96DN0 273 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC10A4Q96EP9 437 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SERPINB12Q96P63 405 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 DDX23Q9BUQ8 820 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ASNSD1Q9NWL6 643 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CYP39A1Q9NYL5 469 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 NOD1Q9Y239 953 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 LTN1O94822 1766 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ADSSP30520 456 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PIGHQ14442 188 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PDCD7Q8N8D1 485 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CDKL2Q92772 493 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SMARCAD1Q9H4L7 1026 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZNF214Q9UL59 606 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 A0A0B4J269 797 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CLEC16AQ2KHT3 1053 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CFAP157Q5JU67 520 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SDCCAG8Q86SQ7 713 aaPredicted RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RASGEF1CQ8N431 466 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAM129AQ9BZQ8 928 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ALG13Q9NP73 1137 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PCYOX1Q9UHG3 505 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 IRS2Q9Y4H2 1338 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 MAPK13O15264 365 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPAG7O75391 227 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 PGK2P07205 417 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 UBA1P22314 1058 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 STIP1P31948 543 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RGS7P49802 495 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 CENPCQ03188 943 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 RNASELQ05823 741 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 MKRN3Q13064 507 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 DGKZQ13574 1117 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ATF7IP2Q5U623 682 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ANKMY2Q8IV38 441 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTC39CQ8N584 583 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 DNAAF3Q8N9W5 541 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 C3orf20Q8ND61 904 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARHGAP28Q9P2N2 729 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 NAALADL1Q9UQQ1 740 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 SRRM3A6NNA2 597 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ACKR2O00590 384 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 HBP1O60381 514 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CPP00450 1065 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ASS1P00966 412 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 GLRA2P23416 452 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 RFC1P35251 1148 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 EIF3EP60228 445 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMPRSS15P98073 1019 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 GRM1Q13255 1194 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 NFIL3Q16649 462 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TSNAXIP1Q2TAA8 658 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAM47CQ5HY64 1035 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 C3orf62Q6ZUJ4 267 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PACS2Q86VP3 889 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms