RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 POLR3FQ9H1D9 316 aaPredicted RBP11.61□□□□□ -0.55
COL4A1-205ENST00000615732 ST6GALNAC4Q9H4F1 302 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 C17orf75Q9HAS0 396 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 GPRC5CQ9NQ84 441 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 KMT5AQ9NQR1 393 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 MRPL17Q9NRX2 175 aaKnown RBP11.61□□□□□ -0.55
COL4A1-205ENST00000615732 AGPAT3Q9NRZ7 376 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 FAM207AQ9NSI2 230 aaPredicted RBP11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CACNG4Q9UBN1 327 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 KCNG1Q9UIX4 513 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 SIK3Q9Y2K2 1263 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 PPP2R2CQ9Y2T4 447 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 RIF1Q5UIP0 2472 aaKnown RBP11.6□□□□□ -0.55
COL4A1-205ENST00000615732 ARL5CA6NH57 179 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 GAS2O43903 313 aaKnown RBP11.6□□□□□ -0.55
COL4A1-205ENST00000615732 EXOC3O60645 756 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 SOD2P04179 222 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 TUBB4AP04350 444 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 KRT13P13646 458 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 AOC1P19801 751 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 FECHP22830 423 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 ABCD1P33897 745 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 PTENP60484 403 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
COL4A1-205ENST00000615732 MBTD1Q05BQ5 628 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 NOTUMQ6P988 496 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 HAUS6Q7Z4H7 955 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 GPR149Q86SP6 731 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 GLYCTKQ8IVS8 523 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 SPIRE2Q8WWL2 714 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
COL4A1-205ENST00000615732 DNAJC7Q99615 494 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 EDEM3Q9BZQ6 932 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 MIOSQ9NXC5 875 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 DUSP12Q9UNI6 340 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 PPME1Q9Y570 386 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 GVINP1Q7Z2Y8 2422 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 WDR87Q6ZQQ6 2873 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 FAM186AA6NE01 2351 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
COL4A1-205ENST00000615732 DNAH14Q0VDD8 3507 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 TEX28O15482 410 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 NARSO43776 548 aaKnown RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 LILRB3O75022 631 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 RFPL2O75678 378 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 AKAP3O75969 853 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 IPO7O95373 1038 aaKnown RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 NPTXRO95502 500 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 GLUD1P00367 558 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 ALDH2P05091 517 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 GLRA2P23416 452 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 AKAP5P24588 427 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 CYLC1P35663 651 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 NPTX2P47972 431 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 GLUD2P49448 558 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 GTF2BQ00403 316 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 TDGQ13569 410 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 PPP2R5AQ15172 486 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 AMHR2Q16671 573 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 SLC9A9Q8IVB4 645 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 EXOC8Q8IYI6 725 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 ST13P5Q8NFI4 369 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 ACSF2Q96CM8 615 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 RPS6KC1Q96S38 1066 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 STRA6Q9BX79 667 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 TRIM6Q9C030 488 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 TTYH3Q9C0H2 523 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 KLK14Q9P0G3 267 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
COL4A1-205ENST00000615732 PTPRZ1P23471 2315 aaPredicted RBP11.59□□□□□ -0.55
COL4A1-205ENST00000615732 ZNF292O60281 2723 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 LRRIQ4A6NIV6 560 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 RNF225M0QZC1 329 aaPredicted RBP11.58□□□□□ -0.56
COL4A1-205ENST00000615732 INPPL1O15357 1258 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 ADH1AP07327 375 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 RPL17P18621 184 aaKnown RBP11.58□□□□□ -0.56
COL4A1-205ENST00000615732 CASP4P49662 377 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 DSC1Q08554 894 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 TFDP1Q14186 410 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 MXD4Q14582 209 aaPredicted RBP11.58□□□□□ -0.56
COL4A1-205ENST00000615732 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 GBP6Q6ZN66 633 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 OTOP3Q7RTS5 596 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 SIX5Q8N196 739 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms