RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ENC1O14682 589 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 HGSO14964 777 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 BRINP1O60477 761 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 PFDN1O60925 122 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 HSPA4LO95757 839 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 STAU1O95793 577 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 C6orf222P0C671 652 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 VCLP18206 1134 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 TFEBP19484 476 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 JAK1P23458 1154 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 GUCY1A2P33402 732 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SLC26A3P40879 764 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ABCG1P45844 678 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SCNN1GP51170 649 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ARFIP1P53367 373 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SLC12A2P55011 1212 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 S100A12P80511 92 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 XRCC4Q13426 336 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ADAM15Q13444 863 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CUL1Q13616 776 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 FRG1Q14331 258 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 PRRT3Q5FWE3 981 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 DCAF17Q5H9S7 520 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 TMEM67Q5HYA8 995 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ZBTB41Q5SVQ8 909 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 GPATCH4Q5T3I0 446 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF658Q5TYW1 1059 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SPECC1LQ69YQ0 1117 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 GRAMD4Q6IC98 578 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 LPCAT2Q7L5N7 544 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 KRT28Q7Z3Y7 464 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 WDR49Q8IV35 697 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SCUBE1Q8IWY4 988 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CPSF7Q8N684 471 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ZBTB38Q8NAP3 1195 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 XXYLT1Q8NBI6 393 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SLC4A11Q8NBS3 891 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CNNM3Q8NE01 707 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 STKLD1Q8NE28 680 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 OR6S1Q8NH40 331 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 NSUN6Q8TEA1 469 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 OSCP1Q8WVF1 389 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CPLX3Q8WVH0 158 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 EFHD2Q96C19 240 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CCDC43Q96MW1 224 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 FAM193BQ96PV7 902 aaPredicted RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 DHRS9Q9BPW9 319 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CHCHD6Q9BRQ6 235 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 DESI2Q9BSY9 194 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ZCCHC2Q9C0B9 1178 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ADNPQ9H2P0 1102 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 SNX25Q9H3E2 840 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 IFT22Q9H7X7 185 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 DDX4Q9NQI0 724 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 PIH1D3Q9NQM4 214 aaKnown RBP3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ZBTB40Q9NUA8 1239 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 FAIMQ9NVQ4 179 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 RMND1Q9NWS8 449 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 DACT1Q9NYF0 836 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 EMC3Q9P0I2 261 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 AMACRQ9UHK6 382 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 CLEC4AQ9UMR7 237 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 ANKRD6Q9Y2G4 727 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 BCL9O00512 1426 aa3.22□□□□□ -1.89
CBWD3-209ENST00000614377 NSD2O96028 1365 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 PLEKHG1Q9ULL1 1385 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 DNAJC25-GNG10A0A024R161 153 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 SLC9B1P1A6NJY1 282 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 GOLGA8BA8MQT2 603 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 NOTOA8MTQ0 251 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 EYA2O00167 538 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 E2F3O00716 465 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 TNFRSF21O75509 655 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 SLC22A3O75751 556 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 GLRX3O76003 335 aaKnown RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 URI1O94763 535 aaPredicted RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 PRPF6O94906 941 aaKnown RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 GOSR1O95249 250 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 TRIM16O95361 564 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 ITGB3P05106 788 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 ATP5BP06576 529 aaKnown RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 CLTAP09496 248 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 AKR1B1P15121 316 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 PRKACAP17612 351 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 LAG3P18627 525 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 IDUAP35475 653 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 MTIF2P46199 727 aaKnown RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 HSD17B4P51659 736 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 KRT85P78386 507 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 DNM1Q05193 864 aaKnown RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 TRIM14Q14142 442 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 GRM3Q14832 879 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 NONOQ15233 471 aaKnown RBP eCLIP3.21□□□□□ -1.89
CBWD3-209ENST00000614377 CNGA2Q16280 664 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 P3H1Q32P28 736 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 IQSEC1Q6DN90 963 aa3.21□□□□□ -1.89
CBWD3-209ENST00000614377 OR52E8Q6IFG1 317 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms