RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KIAA1217Q5T5P2 1943 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 DDX39AO00148 427 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 MAPK13O15264 365 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 MAGEB2O15479 319 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 CALUO43852 315 aaPredicted RBP23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 SP2Q02086 613 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 ZRSR2Q15696 482 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 LY6KQ17RY6 165 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 HERC4Q5GLZ8 1057 aaPredicted RBP23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 OLFML2BQ68BL8 750 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 NLRX1Q86UT6 975 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 VSIG1Q86XK7 387 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 FAM192AQ9GZU8 254 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 WHRNQ9P202 907 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 PTCH2Q9Y6C5 1203 aa23.25■■□□□ 1.31
POLR2J3-220ENST00000613744 ARIH2O95376 493 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 GNRH1P01148 92 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 SOX5P35711 763 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 CALCOCO2Q13137 446 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 KIFAP3Q92845 792 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 SYT11Q9BT88 431 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 FGFBP2Q9BYJ0 223 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 KATNBL1Q9H079 304 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 TLE6Q9H808 572 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 SCOCQ9UIL1 159 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 MTUS1Q9ULD2 1270 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 ANKRD62A6NC57 917 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 PDXKO00764 312 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 TBX3O15119 743 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 RNF8O76064 485 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 BRAFP15056 766 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 ADCYAP1R1P41586 468 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 PTDSS1P48651 473 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 PPP1R15BQ5SWA1 713 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 GJC2Q5T442 439 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 OR52E8Q6IFG1 317 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 TAPT1Q6NXT6 567 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 CCDC137Q6PK04 289 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 RPUSD2Q8IZ73 545 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 C12orf50Q8NA57 414 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 SLCO2A1Q92959 643 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 FAM20AQ96MK3 541 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 RPS6KC1Q96S38 1066 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 MYLK2Q9H1R3 596 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 CDC42EP4Q9H3Q1 356 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 AGO4Q9HCK5 861 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 KCNK9Q9NPC2 374 aa23.24■■□□□ 1.31
POLR2J3-220ENST00000613744 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 IPO5O00410 1097 aaKnown RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 CHMP2AO43633 222 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 STAM2O75886 525 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 SEL1L2Q5TEA6 688 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 DNAAF5Q86Y56 855 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ALG3Q92685 438 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 GPRASP2Q96D09 838 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ZNF333Q96JL9 665 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 PITPNM3Q9BZ71 974 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ZMYND8Q9ULU4 1186 aaPredicted RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 TAC1P20366 129 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 RPL13P26373 211 aaKnown RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 VHLP40337 213 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 TUBP50607 506 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 IL9RQ01113 521 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 IRF5Q13568 498 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 LONRF1Q17RB8 773 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 RGS9BPQ6ZS82 235 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ARHGAP22Q7Z5H3 698 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ANKRD42Q8N9B4 389 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 UHMK1Q8TAS1 419 aaKnown RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 EZH1Q92800 747 aaPredicted RBP23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 COPS5Q92905 334 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 ABHD16BQ9H3Z7 469 aa23.23■■□□□ 1.31
POLR2J3-220ENST00000613744 SPATA31C2B4DYI2 1134 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 NVLO15381 856 aaKnown RBP23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 GAS7O60861 476 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 COILP38432 576 aaPredicted RBP23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 OCRLQ01968 901 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 SP4Q02446 784 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 ECM1Q16610 540 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 MUM1Q2TAK8 710 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 NIPA1Q7RTP0 329 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 LRRC37BQ96QE4 947 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 STK33Q9BYT3 514 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 GCNT4Q9P109 453 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 TELO2Q9Y4R8 837 aa23.22■■□□□ 1.31
POLR2J3-220ENST00000613744 DOCK5Q9H7D0 1870 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 IGHA2P01877 340 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 PDHA1P08559 390 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 PLA2G4BP0C869 781 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 SKIP12755 728 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 ZNF211Q13398 564 aaPredicted RBP23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 KNOP1Q1ED39 458 aaKnown RBP23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 UBAP2Q5T6F2 1119 aaKnown RBP23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 MFSD14CQ5VZR4 134 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 TTC27Q6P3X3 843 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 ADAT2Q7Z6V5 191 aaKnown RBP23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 TRPV1Q8NER1 839 aa23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 LENG1Q96BZ8 264 aaPredicted RBP23.21■■□□□ 1.31
POLR2J3-220ENST00000613744 ZSWIM1Q9BR11 485 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms