RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ADAM22Q9P0K1 906 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ZC3H7BQ9UGR2 993 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 ARPC4-TTLL3A0A0A6YYG9 625 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 TMEM110Q86TL2 294 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 FKBP14Q9NWM8 211 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PTDSS1P48651 473 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 MECOMQ03112 1051 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 BTKQ06187 659 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 LRRC14Q15048 493 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 IMPG1Q17R60 797 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 IYDQ6PHW0 289 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 STRA8Q7Z7C7 330 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 IFNL3Q8IZI9 196 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 APPL2Q8NEU8 664 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PLA2R1Q13018 1463 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PRLP01236 227 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ERO1BQ86YB8 467 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PALB2Q86YC2 1186 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ADSSL1Q8N142 457 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 MAP3K20Q9NYL2 800 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 CNOT8Q9UFF9 292 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 TUBE1Q9UJT0 475 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 A0A1W2PRG6 482 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 ENPEPQ07075 957 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 EDRF1Q3B7T1 1238 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 RNF43Q68DV7 783 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 GALNT8Q9NY28 637 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 AMACRQ9UHK6 382 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 C15orf38-AP3S2A0A0A6YYH1 394 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 A0A0A6YYK5 440 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 MTSS1O43312 755 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 MAGEA10P43363 369 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 PUDPQ08623 228 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 SHQ1Q6PI26 577 aaKnown RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 ARPINQ7Z6K5 226 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 DCLK2Q8N568 766 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 TDRD5Q8NAT2 981 aaKnown RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 FAM162AQ96A26 154 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 UBXN6Q9BZV1 441 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 IQGAP3Q86VI3 1631 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 LRPAP1P30533 357 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 CCT8P50990 548 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 CHRNB3Q05901 458 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 RABL6Q3YEC7 729 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 ARHGAP17Q68EM7 881 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 AASDHPPTQ9NRN7 309 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 PTPRKQ15262 1439 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 WARSP23381 471 aaKnown RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 ARSEP51690 589 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 BROXQ5VW32 411 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 C11orf88Q6PI97 169 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 VPS33AQ96AX1 596 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 ZDHHC9Q9Y397 364 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 VPS4BO75351 444 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 PSMG1O95456 288 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 FGAP02671 866 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 SEC24CP53992 1094 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 GSCP56915 257 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 CAMK1DQ8IU85 385 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 AADATQ8N5Z0 425 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 CCNYL1Q8N7R7 359 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 TC2NQ8N9U0 490 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 DRAXINQ8NBI3 349 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 MNTQ99583 582 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 FSD1LQ9BXM9 530 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 MAGEE1Q9HCI5 957 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 MYBL2P10244 700 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 SPRP35270 261 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 COX10Q12887 443 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 ZBTB38Q8NAP3 1195 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 TMA16Q96EY4 203 aaKnown RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 VTI1BQ9UEU0 232 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 NEU2Q9Y3R4 380 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 POLR2MP0CAP2 368 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 PCNAP12004 261 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 KCNK10P57789 538 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 NAA20P61599 178 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 FIGNQ5HY92 759 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 FAM102BQ5T8I3 360 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 ZNF589Q86UQ0 364 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.94
TTC28-208ENST00000612946 ZBTB1Q9Y2K1 713 aa9.15□□□□□ -0.94
TTC28-208ENST00000612946 NCAPD2Q15021 1401 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 XPAP23025 273 aaPredicted RBP9.15□□□□□ -0.95
TTC28-208ENST00000612946 NAB1Q13506 487 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 KCNT1Q5JUK3 1230 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 OR8H2Q8N162 312 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 PNPT1Q8TCS8 783 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms