RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CELF5Q8N6W0 485 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 NTN5Q8WTR8 489 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 C22orf23Q9BZE7 217 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 JKAMPQ9P055 326 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 CFAP97Q9P2B7 532 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 ZDHHC8Q9ULC8 765 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 TPCN1Q9ULQ1 816 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 CDHR4A6H8M9 788 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 FRS3O43559 492 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 MATN4O95460 622 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 ITGB1P05556 798 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 GJB1P08034 283 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 PROZP22891 400 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 SLC6A2P23975 617 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 PHKA1P46020 1223 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 NEK3P51956 506 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 SOX8P57073 446 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 NOMO3P69849 1222 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 SLC25A3Q00325 362 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 EXOSC9Q06265 439 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 RABL3Q5HYI8 236 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 ZNF365Q70YC5 407 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 MED25Q71SY5 747 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 C11orf96Q7Z7L8 435 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 FITM2Q8N6M3 262 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 IL31RAQ8NI17 732 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 TBC1D15Q8TC07 691 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 FBXO41Q8TF61 875 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 ZNF764Q96H86 408 aaPredicted RBP5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 PHACTR3Q96KR7 559 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 MRGPRX1Q96LB2 322 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 APOL5Q9BWW9 433 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 LRRC27Q9C0I9 530 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 NUP62CLQ9H1M0 184 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 RSAD1Q9HA92 442 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 CHST12Q9NRB3 414 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 PIH1D1Q9NWS0 290 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 GPRC5BQ9NZH0 403 aa5.34□□□□□ -1.55
SMCHD1-213ENST00000609587 DRGXA6NNA5 263 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 TRIM24O15164 1050 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 AGFG2O95081 481 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 MYL3P08590 195 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 MYF5P13349 255 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 NPR1P16066 1061 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 HDCP19113 662 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC7A1P30825 629 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 KCNJ5P48544 419 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 CHN2P52757 468 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 RHBDL3P58872 404 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 KIF22Q14807 665 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 EMC10Q5UCC4 262 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 LAIR1Q6GTX8 287 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 ANKS1AQ92625 1134 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 APIPQ96GX9 242 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF700Q9H0M5 742 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC45A2Q9UMX9 530 aa5.33□□□□□ -1.56
SMCHD1-213ENST00000609587 USP19O94966 1318 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 PRSS29PA6NIE9 313 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 ANXA1P04083 346 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 IFIT2P09913 472 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 RARBP10826 455 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC5A1P13866 664 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 PSMC1P62191 440 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 BRD3Q15059 726 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 PDSS2Q86YH6 399 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 SYT12Q8IV01 421 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 KRT78Q8N1N4 520 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 P2RX7Q99572 595 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 REXO4Q9GZR2 422 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 KIAA1586Q9HCI6 787 aa5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.32□□□□□ -1.56
SMCHD1-213ENST00000609587 TMEM191CA6NGB0 347 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF785A8K8V0 405 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 ISM1B1AKI9 464 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 MYO1FO00160 1098 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 PEX14O75381 377 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 RECQL4O94761 1208 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 GNAI2P04899 355 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 BRAFP15056 766 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 NHLH2Q02577 135 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 PCSK9Q8NBP7 692 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC17A8Q8NDX2 589 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 GPR150Q8NGU9 434 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 PARD3BQ8TEW8 1205 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 KBTBD7Q8WVZ9 684 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 SUCLG2Q96I99 432 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 NAA15Q9BXJ9 866 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 TRIM54Q9BYV2 358 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 BTBD1Q9H0C5 482 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF287Q9HBT7 754 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 OGDHLQ9ULD0 1010 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 PHTF1Q9UMS5 762 aa5.31□□□□□ -1.56
SMCHD1-213ENST00000609587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms