RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TRIP11Q15643 1979 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 PIRO00625 290 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 ZNF623O75123 536 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CILPO75339 1184 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 FTCDO95954 541 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CFHP08603 1231 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 HSPA6P17066 643 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 ATF7P17544 494 aaPredicted RBP23.01■■□□□ 1.27
USP6NL-204ENST00000606752 DSC3Q14574 896 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 MTFR1Q15390 333 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 NAA35Q5VZE5 725 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 PPP1R2P3Q6NXS1 205 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 MRPL10Q7Z7H8 261 aaKnown RBP23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CEP112Q8N8E3 955 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CPA5Q8WXQ8 436 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 DEFB118Q96PH6 123 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CTTNBP2NLQ9P2B4 639 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 PPEF2O14830 753 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 SRGAP2O75044 1071 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 CYP1A2P05177 515 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 TCP1P17987 556 aaKnown RBP23■■□□□ 1.27
USP6NL-204ENST00000606752 NSFP46459 744 aaKnown RBP23■■□□□ 1.27
USP6NL-204ENST00000606752 CDK7P50613 346 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 RAB27AP51159 221 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 RAD23BP54727 409 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 NOMO3P69849 1222 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 MCOLN2Q8IZK6 566 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 LRRN4CLQ8ND94 238 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 WHAMMQ8TF30 809 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 ZNF653Q96CK0 615 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 TRIM11Q96F44 468 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 BARX2Q9UMQ3 279 aaPredicted RBP23■■□□□ 1.27
USP6NL-204ENST00000606752 HYOU1Q9Y4L1 999 aa23■■□□□ 1.27
USP6NL-204ENST00000606752 PTGESO14684 152 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 MGEA5O60502 916 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 MYCP01106 439 aaPredicted RBP22.99■■□□□ 1.27
USP6NL-204ENST00000606752 BRD2P25440 801 aaKnown RBP22.99■■□□□ 1.27
USP6NL-204ENST00000606752 INCA1Q0VD86 236 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 TRAF7Q6Q0C0 670 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 TFAP2BQ92481 460 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 ZSWIM1Q9BR11 485 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 RNF208Q9H0X6 261 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 PCDHGC3Q9UN70 934 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 COG5Q9UP83 839 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 GIT1Q9Y2X7 761 aa22.99■■□□□ 1.27
USP6NL-204ENST00000606752 A0A0U1RQF3 1178 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 NCK2O43639 380 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 BUB1BO60566 1050 aaPredicted RBP22.98■■□□□ 1.27
USP6NL-204ENST00000606752 MTA2O94776 668 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 MYBL1P10243 752 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 CCL5P13501 91 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 PNPLA4P41247 253 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 DAAM2Q86T65 1068 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 PASD1Q8IV76 773 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 TMEM176AQ96HP8 235 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 ZFP42Q96MM3 310 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 PPP1R10Q96QC0 940 aaKnown RBP22.98■■□□□ 1.27
USP6NL-204ENST00000606752 OSBPL9Q96SU4 736 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 OGDHLQ9ULD0 1010 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 SNX9Q9Y5X1 595 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 FRMPD3Q5JV73 1810 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 MEIS3P2A8K0S8 358 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 MED7O43513 233 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 LSM8O95777 96 aaKnown RBP22.98■■□□□ 1.27
USP6NL-204ENST00000606752 SOX4Q06945 474 aaPredicted RBP22.98■■□□□ 1.27
USP6NL-204ENST00000606752 SLC4A11Q8NBS3 891 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 CAGE1Q8TC20 777 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 VCPIP1Q96JH7 1222 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 ZNF560Q96MR9 790 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 ADAM2Q99965 735 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 ELOVL4Q9GZR5 314 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 SLC38A7Q9NVC3 462 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 UVRAGQ9P2Y5 699 aa22.98■■□□□ 1.27
USP6NL-204ENST00000606752 CNOT8Q9UFF9 292 aaKnown RBP22.98■■□□□ 1.27
USP6NL-204ENST00000606752 EFCAB8A8MWE9 144 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 TFRCP02786 760 aaKnown RBP22.97■■□□□ 1.27
USP6NL-204ENST00000606752 SKIP12755 728 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 CD19P15391 556 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 LRPAP1P30533 357 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 SSTR3P32745 418 aaPredicted RBP22.97■■□□□ 1.27
USP6NL-204ENST00000606752 AGMOQ6ZNB7 445 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 MON1BQ7L1V2 547 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 PHF13Q86YI8 300 aaPredicted RBP22.97■■□□□ 1.27
USP6NL-204ENST00000606752 GSTCDQ8NEC7 633 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 TWNKQ96RR1 684 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 GAD1Q99259 594 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 ZNF518BQ9C0D4 1074 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 ABCB6Q9NP58 842 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 AVENQ9NQS1 362 aaPredicted RBP22.97■■□□□ 1.27
USP6NL-204ENST00000606752 HMGXB4Q9UGU5 601 aa22.97■■□□□ 1.27
USP6NL-204ENST00000606752 TADA3O75528 432 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 MLH1P40692 756 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 NDST1P52848 882 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 RPS6KA1Q15418 735 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 PEX26Q7Z412 305 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 TMEM35BQ8NCS4 154 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 LPPQ93052 612 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 RPS6KC1Q96S38 1066 aa22.96■■□□□ 1.27
USP6NL-204ENST00000606752 NUP85Q9BW27 656 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms