RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 LTBRP36941 435 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 ARPP19P56211 112 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 DLG4P78352 724 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 TFF2Q03403 129 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 KCNC3Q14003 757 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 RAB33AQ14088 237 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 MRPL58Q14197 206 aaKnown RBP17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 CLUL1Q15846 466 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 TPD52L1Q16890 204 aaPredicted RBP17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 LIN9Q5TKA1 542 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 CES5AQ6NT32 575 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 TTI2Q6NXR4 508 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 VN1R2Q8NFZ6 395 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 FAM84AQ96KN4 292 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 PLEKHA4Q9H4M7 779 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 CLEC1BQ9P126 229 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 FBXL5Q9UKA1 691 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 SNX9Q9Y5X1 595 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 TGM5O43548 720 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 C4BPAP04003 597 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TRIM49P0CI25 452 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TRIM49CP0CI26 452 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 CPB1P15086 417 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 ELF1P32519 619 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 GTF2H1P32780 548 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TNNC1P63316 161 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 DLX2Q07687 328 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 NCOA4Q13772 614 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 ZACNQ401N2 412 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 DCAF17Q5H9S7 520 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TDRD10Q5VZ19 366 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 FRMD5Q7Z6J6 570 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TMEM86AQ8N2M4 240 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 CCDC150Q8NCX0 1101 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 CXorf38Q8TB03 319 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 BORCS6Q96GS4 357 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 MMS19Q96T76 1030 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 DUSP9Q99956 384 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 IMPG2Q9BZV3 1241 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 TSC2P49815 1807 aa17.21■□□□□ 0.35
PPFIA3-213ENST00000602905 P4HA1P13674 534 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 MYL7Q01449 175 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 ITIH3Q06033 890 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 WSCD1Q658N2 575 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 TPGS2Q68CL5 300 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 PTCRAQ6ISU1 281 aaPredicted RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SLC8B1Q6J4K2 584 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 CCDC149Q6ZUS6 474 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SV2AQ7L0J3 742 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SPATA18Q8TC71 538 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 MSLNLQ96KJ4 702 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 ASB2Q96Q27 587 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 SRRTQ9BXP5 876 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 GZF1Q9H116 711 aaPredicted RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 TMEM8AQ9HCN3 771 aa17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 TCF20Q9UGU0 1960 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-213ENST00000602905 ADAM12O43184 909 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 TBC1D4O60343 1298 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 STAU1O95793 577 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 CCDC192P0DO97 292 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 GCLMP48507 274 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 LHX1P48742 406 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 MYL6P60660 151 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 ROR1Q01973 937 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 DPCR1Q3MIW9 517 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 ZNF667Q5HYK9 610 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 RARS2Q5T160 578 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 KRT39Q6A163 491 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 LILRA6Q6PI73 481 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 RSPO2Q6UXX9 243 aaPredicted RBP17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 RTL10Q7L3V2 364 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 ZNF461Q8TAF7 563 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 TAF4BQ92750 862 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 APOL5Q9BWW9 433 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 FBXW11Q9UKB1 542 aa17.19■□□□□ 0.34
PPFIA3-213ENST00000602905 MAFFQ9ULX9 164 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms