RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 CKAP2Q8WWK9 683 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 KCNN1Q92952 543 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 RBM15Q96T37 977 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMG9-211ENST00000601170 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
SMG9-211ENST00000601170 NAALADL1Q9UQQ1 740 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 ADCY1Q08828 1119 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 CYP4F22Q6NT55 531 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 SEPT14Q6ZU15 432 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 SRRM1Q8IYB3 904 aaKnown RBP15.32■□□□□ 0.04
SMG9-211ENST00000601170 ZCCHC9Q8N567 271 aaKnown RBP15.32■□□□□ 0.04
SMG9-211ENST00000601170 GLIS1Q8NBF1 620 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 C12orf42Q96LP6 360 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 GGT7Q9UJ14 662 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 DNPEPQ9ULA0 475 aa15.32■□□□□ 0.04
SMG9-211ENST00000601170 LIASO43766 372 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ATF7P17544 494 aaPredicted RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 MMP8P22894 467 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 CETN2P41208 172 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 MAGEA4P43358 317 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 STAT4Q14765 748 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 CCDC63Q8NA47 563 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 RBM41Q96IZ5 413 aaKnown RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 SLITRK1Q96PX8 696 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 MGRN1O60291 552 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 SUN1O94901 812 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ATG7O95352 703 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 KRT1P04264 644 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 STX2P32856 288 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 RDXP35241 583 aaKnown RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 ZNF132P52740 706 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ELF3P78545 371 aaPredicted RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 LMNB2Q03252 620 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ZNF252P-AS1Q0IIN9 211 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 FSTL1Q12841 308 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 ZKSCAN8Q15776 578 aaPredicted RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 PRAMEF18Q5VWM3 479 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 MFSD7Q6UXD7 560 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
SMG9-211ENST00000601170 IMPG2Q9BZV3 1241 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 EURLQ9NYK6 297 aa15.31■□□□□ 0.04
SMG9-211ENST00000601170 UBOX5O94941 541 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 CST3P01034 146 aaPredicted RBP15.3■□□□□ 0.04
SMG9-211ENST00000601170 ZSCAN5DPP0CG00 497 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 RXRBP28702 533 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 TGFB2P61812 414 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 CAPSQ13938 189 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 STXBP2Q15833 593 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 ARHGEF18Q6ZSZ5 1173 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 RCOR2Q8IZ40 523 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 MCEEQ96PE7 176 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 AGAP1Q9UPQ3 857 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 ZNF148Q9UQR1 794 aa15.3■□□□□ 0.04
SMG9-211ENST00000601170 DNALI1O14645 258 aaPredicted RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 RPS12P25398 132 aaKnown RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 TNFSF9P41273 254 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 GMPSP49915 693 aaPredicted RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 PDE4CQ08493 712 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 TMED2Q15363 201 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 UBR7Q8N806 425 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 NIFKQ9BYG3 293 aaKnown RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 TMEM134Q9H6X4 195 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 NKIRAS1Q9NYS0 192 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 PIM2Q9P1W9 311 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 RASA4BC9J798 803 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 F8VP50 259 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 RASA4O43374 803 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 TJP3O95049 919 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 ABHD2P08910 425 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 ETS1P14921 441 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
SMG9-211ENST00000601170 SPATA21Q7Z572 469 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 CCHCR1Q8TD31 782 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 MAGEB18Q96M61 343 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 FOXP3Q9BZS1 431 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 ACTL7BQ9Y614 415 aa15.29■□□□□ 0.04
SMG9-211ENST00000601170 EXOC1LA0A1B0GW35 172 aa15.28■□□□□ 0.04
SMG9-211ENST00000601170 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
SMG9-211ENST00000601170 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
SMG9-211ENST00000601170 CALB1P05937 261 aa15.28■□□□□ 0.04
SMG9-211ENST00000601170 BRD2P25440 801 aaKnown RBP15.28■□□□□ 0.04
SMG9-211ENST00000601170 ICAM3P32942 547 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms