RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 TFAMQ00059 246 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 CETN1Q12798 172 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 UPP1Q16831 310 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 DCAF17Q5H9S7 520 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 TDRD10Q5VZ19 366 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 C9orf57Q5W0N0 161 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 LRRC52Q8N7C0 313 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 TAF4BQ92750 862 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 CWH43Q9H720 699 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 SIX4Q9UIU6 781 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 DDHD2O94830 711 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 POMCP01189 267 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 LAG3P18627 525 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 PNPLA4P41247 253 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 ERVFC1P60507 584 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FANCCQ00597 558 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 RNASELQ05823 741 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 NR1I3Q14994 352 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 LMBRD2Q68DH5 695 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FBXL13Q8NEE6 735 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 SUSD6Q92537 303 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 ERGIC2Q96RQ1 377 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM124BQ9H5Z6 455 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
CHMP2A-207ENST00000600804 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.4
CHMP2A-207ENST00000600804 A0A1W2PQC6 194 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 PER2O15055 1255 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 B4GALT3O60512 393 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 VNN1O95497 513 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 SERPINC1P01008 464 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 ALDH2P05091 517 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 GALTP07902 379 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 MYL7Q01449 175 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 NCOA4Q13772 614 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 KCNC3Q14003 757 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 SGSM1Q2NKQ1 1148 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 DCLRE1AQ6PJP8 1040 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 GBP6Q6ZN66 633 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 ZNF560Q96MR9 790 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 TAB2Q9NYJ8 693 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 STK39Q9UEW8 545 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 CDH22Q9UJ99 828 aa12.52□□□□□ -0.41
CHMP2A-207ENST00000600804 FRYLO94915 3013 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 PODXLO00592 558 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 CBFA2T2O43439 604 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 PHACTR2O75167 634 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 ITGB3P05106 788 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 TPM3P06753 285 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 POLR2BP30876 1174 aaKnown RBP12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 PPM1AP35813 382 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 ALDH7A1P49419 539 aaKnown RBP12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 TAF6P49848 677 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 UBASH3AP57075 661 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 BIRC3Q13489 604 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 TRPC3Q13507 836 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 FBXL6Q8N531 539 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 FAM81BQ96LP2 452 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 COLEC11Q9BWP8 271 aa12.51□□□□□ -0.41
CHMP2A-207ENST00000600804 VPS16Q9H269 839 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms