RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 LRRIQ4A6NIV6 560 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 EIF5BO60841 1220 aaKnown RBP19.33■□□□□ 0.68
SSBP4-207ENST00000600244 EDN1P05305 212 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 DRD1P21728 446 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 MAPK8P45983 427 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 MCM2P49736 904 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 DGKEP52429 567 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 RUNX3Q13761 415 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 FBXO43Q4G163 708 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 USP39Q53GS9 565 aaKnown RBP19.33■□□□□ 0.68
SSBP4-207ENST00000600244 TRIM61Q5EBN2 209 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 RPLP0P6Q8NHW5 317 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 ADPGKQ9BRR6 497 aa19.33■□□□□ 0.68
SSBP4-207ENST00000600244 THG1LQ9NWX6 298 aaKnown RBP19.33■□□□□ 0.68
SSBP4-207ENST00000600244 ENGP17813 658 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 HSPA4P34932 840 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 GALK1P51570 392 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
SSBP4-207ENST00000600244 NPY5RQ15761 445 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 ADCK5Q3MIX3 580 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 TSGA10IPQ3SY00 556 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 XKR4Q5GH76 650 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 GPR158Q5T848 1215 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 ZNF280DQ6N043 979 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 ALKAL1Q6UXT8 129 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 CCNI2Q6ZMN8 369 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-207ENST00000600244 DAGLBQ8NCG7 672 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 EZH1Q92800 747 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-207ENST00000600244 NUSAP1Q9BXS6 441 aaKnown RBP19.32■□□□□ 0.68
SSBP4-207ENST00000600244 CRISPLD1Q9H336 500 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 ATXN3LQ9H3M9 355 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
SSBP4-207ENST00000600244 URB1O60287 2271 aaKnown RBP19.31■□□□□ 0.68
SSBP4-207ENST00000600244 ACKR2O00590 384 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 PODXLO00592 558 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 DHPSP49366 369 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-207ENST00000600244 RARRES1P49788 294 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 EPHB3P54753 998 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 PLD1Q13393 1074 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 INF2Q27J81 1249 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 NCAPH2Q6IBW4 605 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 ZBTB8OSQ8IWT0 167 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 BLIDQ8IZY5 108 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 SUSD3Q96L08 255 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 HSD17B14Q9BPX1 270 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 POLR3CQ9BUI4 534 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-207ENST00000600244 SLC26A6Q9BXS9 759 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 CCDC113Q9H0I3 377 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-207ENST00000600244 RAXQ9Y2V3 346 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 GON4LQ3T8J9 2241 aa19.31■□□□□ 0.68
SSBP4-207ENST00000600244 PI4KAP42356 2102 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 PLXNB3Q9ULL4 1909 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 CPB1P15086 417 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 IFNAR1P17181 557 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 DCAF4L1Q3SXM0 396 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 NAIF1Q69YI7 327 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-207ENST00000600244 PPP4R3AQ6IN85 833 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 SLC23A3Q6PIS1 610 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 DNAJB7Q7Z6W7 309 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-207ENST00000600244 RASSF3Q86WH2 238 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 ADAMTS14Q8WXS8 1223 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 TPSD1Q9BZJ3 242 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 TASP1Q9H6P5 420 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 TMEM74BQ9NUR3 256 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 MBD1Q9UIS9 605 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-207ENST00000600244 TBX20Q9UMR3 447 aa19.3■□□□□ 0.68
SSBP4-207ENST00000600244 C1QL1O75973 258 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 PRB1P04280 392 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 DUSP4Q13115 394 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 MAPK6Q16659 721 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 TMEM132AQ24JP5 1023 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 RNF20Q5VTR2 975 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 MDM1Q8TC05 714 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 DDX12PQ92771 950 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 PSMG2Q969U7 264 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 ACDQ96AP0 544 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 ZMAT2Q96NC0 199 aaKnown RBP19.29■□□□□ 0.68
SSBP4-207ENST00000600244 EIF2AK1Q9BQI3 630 aaKnown RBP19.29■□□□□ 0.68
SSBP4-207ENST00000600244 BACH2Q9BYV9 841 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 C2orf40Q9H1Z8 148 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 EBF3Q9H4W6 596 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 ASB3Q9Y575 518 aa19.29■□□□□ 0.68
SSBP4-207ENST00000600244 TNFRSF10BO14763 440 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 FGF19O95750 216 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 GABRR2P28476 465 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 RPL9P32969 192 aaKnown RBP19.28■□□□□ 0.68
SSBP4-207ENST00000600244 AMPD2Q01433 879 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 HNRNPDQ14103 355 aaKnown RBP19.28■□□□□ 0.68
SSBP4-207ENST00000600244 ARHGAP15Q53QZ3 475 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 TRIM68Q6AZZ1 485 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 SYT12Q8IV01 421 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 APPL2Q8NEU8 664 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 TSTD1Q8NFU3 115 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 P2RY13Q9BPV8 354 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 SMG9Q9H0W8 520 aaKnown RBP19.28■□□□□ 0.68
SSBP4-207ENST00000600244 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 NUB1Q9Y5A7 615 aa19.28■□□□□ 0.68
SSBP4-207ENST00000600244 TENM4Q6N022 2769 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms