RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 FAM163BP0C2L3 166 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 CTSAP10619 480 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 YWHAHQ04917 246 aaPredicted RBP20.39■□□□□ 0.85
COPE-209ENST00000599964 SCARA3Q6AZY7 606 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 ANKS3Q6ZW76 656 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 APTXQ7Z2E3 356 aaKnown RBP20.39■□□□□ 0.85
COPE-209ENST00000599964 GAS2L3Q86XJ1 694 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 MICAL1Q8TDZ2 1067 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 TCF25Q9BQ70 676 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 CRACR2AQ9BSW2 395 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 OXCT2Q9BYC2 517 aaPredicted RBP20.39■□□□□ 0.85
COPE-209ENST00000599964 DNAI2Q9GZS0 605 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 CHST7Q9NS84 486 aa20.39■□□□□ 0.85
COPE-209ENST00000599964 CBFA2T2O43439 604 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 CYP11A1P05108 521 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 TBXAS1P24557 533 aaPredicted RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 IGFBP6P24592 240 aaPredicted RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 TKTP29401 623 aaKnown RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 CA8P35219 290 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 UBASH3AP57075 661 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 DSG1Q02413 1049 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 SMC1AQ14683 1233 aaKnown RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 THEM5Q8N1Q8 247 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 TTC39CQ8N584 583 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 GDPD5Q8WTR4 605 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 PCMTD1Q96MG8 357 aaPredicted RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 VN1R3Q9BXE9 311 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 ZBP1Q9H171 429 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 FAM124BQ9H5Z6 455 aaPredicted RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 CYP3A43Q9HB55 503 aa20.38■□□□□ 0.85
COPE-209ENST00000599964 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
COPE-209ENST00000599964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.38■□□□□ 0.852e-15■■■■■ 372.6
COPE-209ENST00000599964 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.38■□□□□ 0.855e-7■□□□□ 8.4
COPE-209ENST00000599964 A0A1B0GTH6 734 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 TRIM21P19474 475 aaKnown RBP20.37■□□□□ 0.85
COPE-209ENST00000599964 YWHAEP62258 255 aaKnown RBP20.37■□□□□ 0.85
COPE-209ENST00000599964 LRMPQ12912 555 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 UVSSAQ2YD98 709 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 VARS2Q5ST30 1063 aaKnown RBP20.37■□□□□ 0.85
COPE-209ENST00000599964 OVOS1Q6IE37 1185 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 SPOPLQ6IQ16 392 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 TRIM65Q6PJ69 517 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 TAS1R1Q7RTX1 841 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 ADGRF2Q8IZF7 708 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 LMO3Q8TAP4 145 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 RIN2Q8WYP3 895 aaPredicted RBP20.37■□□□□ 0.85
COPE-209ENST00000599964 PIK3R5Q8WYR1 880 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 TTYH1Q9H313 450 aaPredicted RBP20.37■□□□□ 0.85
COPE-209ENST00000599964 L1RE1Q9UN81 338 aa20.37■□□□□ 0.85
COPE-209ENST00000599964 LAMA2P24043 3122 aaKnown RBP20.36■□□□□ 0.85
COPE-209ENST00000599964 TACC1O75410 805 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 CXCL14O95715 111 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 SLC9A1P19634 815 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PON1P27169 355 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 LHX1P48742 406 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PLCB2Q00722 1185 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 SOWAHAQ2M3V2 549 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 RTP2Q5QGT7 225 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 WSCD1Q658N2 575 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 ZNF280DQ6N043 979 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 SCARA5Q6ZMJ2 495 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 ENOSF1Q7L5Y1 443 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PPM1KQ8N3J5 372 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PDCL2Q8N4E4 241 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PPP2R3CQ969Q6 453 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 MRPL38Q96DV4 380 aaKnown RBP20.36■□□□□ 0.85
COPE-209ENST00000599964 EMILIN2Q9BXX0 1053 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 SNX25Q9H3E2 840 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 PRDM12Q9H4Q4 367 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 LMCD1Q9NZU5 365 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 IFNKQ9P0W0 207 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 APEX2Q9UBZ4 518 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 POLIQ9UNA4 740 aa20.36■□□□□ 0.85
COPE-209ENST00000599964 TIMM13Q9Y5L4 95 aaPredicted RBP20.36■□□□□ 0.85
COPE-209ENST00000599964 EPOPA6NHQ4 379 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 C2CD2LO14523 706 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 OAZ2O95190 189 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 RFX1P22670 979 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 DNAJB1P25685 340 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 ASPAP45381 313 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 MFAP3P55082 362 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 ERVFC1P60507 584 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 CUL2Q13617 745 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 SYCP1Q15431 976 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 PSMD5Q16401 504 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 CTXN3Q4LDR2 81 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 KIAA0319Q5VV43 1072 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 LIMS2Q7Z4I7 341 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 B3GALT6Q96L58 329 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 ERGIC2Q96RQ1 377 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 APOBEC3GQ9HC16 384 aaKnown RBP20.35■□□□□ 0.85
COPE-209ENST00000599964 DAAM1Q9Y4D1 1078 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 BACE2Q9Y5Z0 518 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 IRAK3Q9Y616 596 aa20.35■□□□□ 0.85
COPE-209ENST00000599964 COL4A4P53420 1690 aaPredicted RBP20.35■□□□□ 0.85
COPE-209ENST00000599964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.34■□□□□ 0.85
COPE-209ENST00000599964 OR6C75A6NL08 312 aa20.34■□□□□ 0.85
COPE-209ENST00000599964 RFXAPO00287 272 aa20.34■□□□□ 0.85
COPE-209ENST00000599964 FSCN2O14926 492 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms