RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	ANAPC5	Q9UJX4	755 aa		5.69	□□□□□ -1.5
PAF1-208	ENST00000598594	PTBP2	Q9UKA9	531 aa	Known RBP	5.69	□□□□□ -1.5
PAF1-208	ENST00000598594	PRDM4	Q9UKN5	801 aa		5.69	□□□□□ -1.5
PAF1-208	ENST00000598594	CBLC	Q9ULV8	474 aa		5.69	□□□□□ -1.5
PAF1-208	ENST00000598594	CSAD	Q9Y600	493 aa		5.69	□□□□□ -1.5
PAF1-208	ENST00000598594	SLC12A8	A0AV02	714 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CTAGE9	A4FU28	777 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594		A8MXE2	369 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ADAM20	O43506	726 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TBC1D4	O60343	1298 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	NDST3	O95803	873 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TSPY4	P0CV99	314 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TSPY10	P0CW01	314 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	HOXD8	P13378	290 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	LAMP2	P13473	410 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TGM1	P22735	817 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	KEL	P23276	732 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TBXAS1	P24557	533 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	PTX3	P26022	381 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	HNMT	P50135	292 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	MRPS9	P82933	396 aa	Known RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	IRF9	Q00978	393 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	AMPD2	Q01433	879 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	DEUP1	Q05D60	604 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ZBTB17	Q13105	803 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	MPP3	Q13368	585 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	IL10RA	Q13651	578 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	GRIK5	Q16478	980 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CRY1	Q16526	586 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	DPY19L1	Q2PZI1	675 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	SMU1	Q2TAY7	513 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ARHGAP15	Q53QZ3	475 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ZNF805	Q5CZA5	627 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TCP11X2	Q5H9J9	407 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	C3orf38	Q5JPI3	329 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	KRBOX4	Q5JUW0	171 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CTR9	Q6PD62	1173 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594		Q6ZVU0	165 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	DHX32	Q7L7V1	743 aa	Known RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	METTL23	Q86XA0	190 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	KIAA2013	Q8IYS2	634 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	DCLK2	Q8N568	766 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CYP2W1	Q8TAV3	490 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CSGALNACT1	Q8TDX6	532 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	FAM216A	Q8WUB2	273 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	NRG4	Q8WWG1	115 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	KAT5	Q92993	513 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	NEIL1	Q96FI4	390 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	SIPA1	Q96FS4	1042 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	RBM14	Q96PK6	669 aa	Known RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	SLC39A3	Q9BRY0	314 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ZPBP	Q9BS86	351 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TSEN34	Q9BSV6	310 aa	Known RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	SPX	Q9BT56	116 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TTPAL	Q9BTX7	342 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	ACE2	Q9BYF1	805 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	OPA3	Q9H6K4	179 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CACNG4	Q9UBN1	327 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	DNAJB9	Q9UBS3	223 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CPSF3	Q9UKF6	684 aa	Known RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CAMK2A	Q9UQM7	478 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TRAF3IP3	Q9Y228	551 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CAB39	Q9Y376	341 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	TMED5	Q9Y3A6	229 aa		5.68	□□□□□ -1.5
PAF1-208	ENST00000598594	CYP2D7	A0A087X1C5	515 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594		A0A0G2JPF8	293 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	LACTBL1	A8MY62	500 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	HNRNPCL3	B7ZW38	293 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594		H3BUI4	141 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594		J3QW42	95 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	WNT9A	O14904	365 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	ASNA1	O43681	348 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	CEP104	O60308	925 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	EXOC3	O60645	756 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	ADAMTS4	O75173	837 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	MTRF1	O75570	445 aa	Known RBP	5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	CAMTA2	O94983	1202 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	TUBB4A	P04350	444 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	LPL	P06858	475 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	ITGA2B	P08514	1039 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	HNRNPCL4	P0DMR1	293 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	CIITA	P33076	1130 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	GPC1	P35052	558 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	GP5	P40197	560 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	BUD31	P41223	144 aa	Predicted RBP	5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	AMPH	P49418	695 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	PNLIPRP1	P54315	467 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	KCNQ4	P56696	695 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	PSMC6	P62333	389 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	DSC2	Q02487	901 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	SLC20A2	Q08357	652 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	NMI	Q13287	307 aa	Predicted RBP	5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	SP140	Q13342	867 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	LASP1	Q14847	261 aa	Known RBP	5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	BAK1	Q16611	211 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	PRAMEF14	Q5SWL7	426 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	ZBTB37	Q5TC79	503 aa		5.67	□□□□□ -1.5
PAF1-208	ENST00000598594	ATG16L1	Q676U5	607 aa		5.67	□□□□□ -1.5

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