RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 ZNF334Q9HCZ1 680 aaPredicted RBP14.76□□□□□ -0.05
TRIM28-211ENST00000597968 HEBP1Q9NRV9 189 aa14.76□□□□□ -0.05
TRIM28-211ENST00000597968 ZSCAN32Q9NX65 697 aa14.76□□□□□ -0.05
TRIM28-211ENST00000597968 OBP2AQ9NY56 170 aa14.76□□□□□ -0.05
TRIM28-211ENST00000597968 R4GN57 208 aa14.76□□□□□ -0.05
TRIM28-211ENST00000597968 RIF1Q5UIP0 2472 aaKnown RBP14.76□□□□□ -0.05
TRIM28-211ENST00000597968 FAM186AA6NE01 2351 aa14.76□□□□□ -0.05
TRIM28-211ENST00000597968 FRYLO94915 3013 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 MYH11P35749 1972 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 ZNF263O14978 683 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 MOSPD3O75425 235 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 IL18RAPO95256 599 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 TARSP26639 723 aaKnown RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 TXLNAP40222 546 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 FCHO2Q0JRZ9 810 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 MCM6Q14566 821 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 TMEM132DQ14C87 1099 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 ADALQ6DHV7 355 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 ZNF720Q7Z2F6 126 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 ZSCAN18Q8TBC5 510 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 ATRIPQ8WXE1 791 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 SECISBP2LQ93073 1101 aaKnown RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 SENP8Q96LD8 212 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 LRRC3Q9BY71 257 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 C8orf33Q9H7E9 229 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 PRMT8Q9NR22 394 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-211ENST00000597968 EXOC7Q9UPT5 735 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 DOCK6Q96HP0 2047 aa14.75□□□□□ -0.05
TRIM28-211ENST00000597968 MTMR11A4FU01 709 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SOBPA7XYQ1 873 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 CHADO15335 359 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 LILRB5O75023 590 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 LDHAP00338 332 aaKnown RBP14.74□□□□□ -0.05
TRIM28-211ENST00000597968 MYL4P12829 197 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 GAP43P17677 238 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SDHBP21912 280 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 PNPLA4P41247 253 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 DUSP4Q13115 394 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 FZD5Q13467 585 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 ALCAMQ13740 583 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 C9orf57Q5W0N0 161 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 JADE1Q6IE81 842 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SLC39A4Q6P5W5 647 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 POTEHQ6S545 545 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 VITQ6UXI7 678 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 METTL23Q86XA0 190 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 TMC8Q8IU68 726 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 ZNF687Q8N1G0 1237 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SUMF1Q8NBK3 374 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 ST13P5Q8NFI4 369 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SPPL2BQ8TCT7 592 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 CHRDQ9H2X0 955 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 AGO2Q9UKV8 859 aaKnown RBP14.74□□□□□ -0.05
TRIM28-211ENST00000597968 MTF2Q9Y483 593 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-211ENST00000597968 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
TRIM28-211ENST00000597968 MIA3Q5JRA6 1907 aa14.74□□□□□ -0.05
TRIM28-211ENST00000597968 FANCMQ8IYD8 2048 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 ARNTLO00327 626 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 LRRN2O75325 713 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 PPP1R37O75864 691 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 GDI1P31150 447 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 TAF6P49848 677 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 SPAG1Q07617 926 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 DHX8Q14562 1220 aaKnown RBP14.73□□□□□ -0.05
TRIM28-211ENST00000597968 VEPH1Q14D04 833 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 ARHGAP15Q53QZ3 475 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 SHKBP1Q8TBC3 707 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 SPATA18Q8TC71 538 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 CSGALNACT1Q8TDX6 532 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 LRRC15Q8TF66 581 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 FAM3CQ92520 227 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 ZSWIM3Q96MP5 696 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 STRA6Q9BX79 667 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 DNAJC25Q9H1X3 360 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 EPC1Q9H2F5 836 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 ZHX3Q9H4I2 956 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 SLITRK6Q9H5Y7 841 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 OLFML3Q9NRN5 406 aa14.73□□□□□ -0.05
TRIM28-211ENST00000597968 TIMM13Q9Y5L4 95 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-211ENST00000597968 SHISA7A6NL88 538 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 HEPACAM2A8MVW5 462 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 VNN2O95498 520 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 CD72P21854 359 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 CDC25CP30307 473 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 NMT1P30419 496 aaKnown RBP14.72□□□□□ -0.05
TRIM28-211ENST00000597968 CCR3P51677 355 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 PLCB2Q00722 1185 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 CSTF1Q05048 431 aaKnown RBP14.72□□□□□ -0.05
TRIM28-211ENST00000597968 LRRC32Q14392 662 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 PTPAQ15257 358 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 TEAD2Q15562 447 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 SV2CQ496J9 727 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 ARHGAP29Q52LW3 1261 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 CCDC73Q6ZRK6 1079 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 SV2BQ7L1I2 683 aa14.72□□□□□ -0.05
TRIM28-211ENST00000597968 DNAJB7Q7Z6W7 309 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms