RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MEA1Q16626 185 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 SCARA3Q6AZY7 606 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 WDR59Q6PJI9 974 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 TMEM139Q8IV31 216 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 RPUSD2Q8IZ73 545 aaKnown RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 KAT5Q92993 513 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 JAKMIP2Q96AA8 810 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 FAXDC2Q96IV6 333 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 CCDC42Q96M95 316 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 KREMEN1Q96MU8 473 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 DEF6Q9H4E7 631 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 ELAC1Q9H777 363 aaKnown RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 IL23AQ9NPF7 189 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 MIOSQ9NXC5 875 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 PYCARDQ9ULZ3 195 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 EPOPA6NHQ4 379 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 SOWAHDA6NJG2 315 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 STAU1O95793 577 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 KRT5P13647 590 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 YWHAEP62258 255 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 IKBKEQ14164 716 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 TDRD12Q587J7 1177 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 C9orf57Q5W0N0 161 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 GLB1LQ6UWU2 654 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 OTOP2Q7RTS6 562 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 IRF2BP2Q7Z5L9 587 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 GPIHBP1Q8IV16 184 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 CCDC170Q8IYT3 715 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 LINC01599Q8WXQ3 324 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 ZFP42Q96MM3 310 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 PPP1R10Q96QC0 940 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 PHOX2BQ99453 314 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 NIF3L1Q9GZT8 377 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 NHEJ1Q9H9Q4 299 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 TMEM161AQ9NX61 479 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 INPP5FQ9Y2H2 1132 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 PCDHB4Q9Y5E5 795 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
SHKBP1-209ENST00000595803 PIRO00625 290 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 PTGESO14684 152 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 AKR1B10O60218 316 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 LRPAP1P30533 357 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 EIF4A3P38919 411 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 PNPLA4P41247 253 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 SCNN1GP51170 649 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 BPIFB4P59827 614 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 TNNC1P63316 161 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 VPS36Q86VN1 386 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 FAM71AQ8IYT1 594 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 TMEM130Q8N3G9 435 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 LRRC52Q8N7C0 313 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 GSTCDQ8NEC7 633 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 URGCPQ8TCY9 931 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 SHC3Q92529 594 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 ZNF560Q96MR9 790 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 XYLT2Q9H1B5 865 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 HAUS4Q9H6D7 363 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 VRTNQ9H8Y1 702 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 CYP3A43Q9HB55 503 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 KANSL3Q9P2N6 904 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 POLIQ9UNA4 740 aa13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 EPN1Q9Y6I3 576 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-209ENST00000595803 TRIP11Q15643 1979 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 SSU72P8A0A1W2PR75 194 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 CYP26A1O43174 497 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 IPO7O95373 1038 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 POMCP01189 267 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 FGBP02675 491 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 PNMA6AP0CW24 399 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 TNFAIP3P21580 790 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 RPL9P32969 192 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 PRKCIP41743 596 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 GRIK3Q13003 919 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 E4F1Q66K89 784 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 HGSNATQ68CP4 663 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 SMYD5Q6GMV2 418 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 ABI1Q8IZP0 508 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 ARHGAP20Q9P2F6 1191 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 ZDBF2Q9HCK1 2354 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
SHKBP1-209ENST00000595803 BRWD1Q9NSI6 2320 aa13.96□□□□□ -0.17
SHKBP1-209ENST00000595803 RALGAPA2Q2PPJ7 1873 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms