RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NCOA4Q13772 614 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 KCNC3Q14003 757 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 TCERG1LQ5VWI1 586 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 WSCD1Q658N2 575 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 OVOS1Q6IE37 1185 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 RSPO2Q6UXX9 243 aaPredicted RBP15.44■□□□□ 0.06
LIG1-208ENST00000595758 TMEM184AQ6ZMB5 413 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 C15orf39Q6ZRI6 1047 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 METTL23Q86XA0 190 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 CASP10Q92851 521 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 MMRN2Q9H8L6 949 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 ANO10Q9NW15 660 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 FBXL5Q9UKA1 691 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 SNX9Q9Y5X1 595 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 CDY1Q9Y6F8 540 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 VWA8A3KMH1 1905 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 TBC1D4O60343 1298 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 VNN1O95497 513 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 GLUD1P00367 558 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 C1RP00736 705 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 CYP11A1P05108 521 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 EPCAMP16422 314 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 ATICP31939 592 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 DLX2Q07687 328 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 RAB33AQ14088 237 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 SKOR2Q2VWA4 1001 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 OXCT2Q9BYC2 517 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 TMEM8AQ9HCN3 771 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 CLEC1BQ9P126 229 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 THEGQ9P2T0 379 aa15.43■□□□□ 0.06
LIG1-208ENST00000595758 BARX2Q9UMQ3 279 aaPredicted RBP15.43■□□□□ 0.06
LIG1-208ENST00000595758 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 H3BQ06 376 aaPredicted RBP15.42■□□□□ 0.06
LIG1-208ENST00000595758 TGM5O43548 720 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 TBX10O75333 385 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 CLSTN1O94985 981 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 STAU1O95793 577 aaKnown RBP15.42■□□□□ 0.06
LIG1-208ENST00000595758 SPATA31D3P0C874 917 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 ARPP19P56211 112 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 STX1AQ16623 288 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 SGSM1Q2NKQ1 1148 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 ZNF699Q32M78 642 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 KRT39Q6A163 491 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 SLC8B1Q6J4K2 584 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 LILRA6Q6PI73 481 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 SPATA31D4Q6ZUB0 917 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 THEM5Q8N1Q8 247 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 TOP6BLQ8N6T0 577 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 XYLT2Q9H1B5 865 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 DZANK1Q9NVP4 752 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 DPP7Q9UHL4 492 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 L1RE1Q9UN81 338 aa15.42■□□□□ 0.06
LIG1-208ENST00000595758 LETM1O95202 739 aaPredicted RBP15.41■□□□□ 0.06
LIG1-208ENST00000595758 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 CCDC192P0DO97 292 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
LIG1-208ENST00000595758 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 MXI1P50539 228 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TNNC1P63316 161 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TFF2Q03403 129 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TYRO3Q06418 890 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 CLUL1Q15846 466 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 AAK1Q2M2I8 961 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 SOWAHAQ2M3V2 549 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 ANKRD54Q6NXT1 300 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 ELMSAN1Q6PJG2 1045 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TMEM86AQ8N2M4 240 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TAS1R2Q8TE23 839 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 HDAC7Q8WUI4 952 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 TAF4BQ92750 862 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 MSLNLQ96KJ4 702 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 MMS19Q96T76 1030 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 VRTNQ9H8Y1 702 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 MAN1C1Q9NR34 630 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
LIG1-208ENST00000595758 CD207Q9UJ71 328 aa15.41■□□□□ 0.06
LIG1-208ENST00000595758 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 MARSP56192 900 aaKnown RBP15.4■□□□□ 0.06
LIG1-208ENST00000595758 ROR1Q01973 937 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 LEXMQ3ZCV2 418 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 ZNF667Q5HYK9 610 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 LIMS2Q7Z4I7 341 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 CREBRFQ8IUR6 639 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 TRIM59Q8IWR1 403 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 KREMEN2Q8NCW0 462 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 ATXN2LQ8WWM7 1075 aaKnown RBP15.4■□□□□ 0.06
LIG1-208ENST00000595758 RTP3Q9BQQ7 232 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 PLEKHA4Q9H4M7 779 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 THAP9Q9H5L6 903 aa15.4■□□□□ 0.06
LIG1-208ENST00000595758 REV3LO60673 3130 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms