RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LRRC3Q9BY71 257 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 DNAJC25Q9H1X3 360 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 CRISPLD1Q9H336 500 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 CPSF3Q9UKF6 684 aaKnown RBP25.97■■□□□ 1.75
LSM4-202ENST00000593564 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.97■■□□□ 1.75
LSM4-202ENST00000593564 PPEF2O14830 753 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 KRT18P05783 430 aaKnown RBP25.96■■□□□ 1.75
LSM4-202ENST00000593564 EPHB3P54753 998 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 LILRA4P59901 499 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 DUSP4Q13115 394 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 KARSQ15046 597 aaKnown RBP25.96■■□□□ 1.75
LSM4-202ENST00000593564 BRAPQ7Z569 592 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 TMC8Q8IU68 726 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 ZBTB44Q8NCP5 570 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 ATRIPQ8WXE1 791 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 ZSCAN32Q9NX65 697 aa25.96■■□□□ 1.75
LSM4-202ENST00000593564 TBCAO75347 108 aaKnown RBP25.95■■□□□ 1.74
LSM4-202ENST00000593564 ODC1P11926 461 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 GTF2BQ00403 316 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 GRIN1Q05586 938 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 JADE1Q6IE81 842 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 CENPPQ6IPU0 288 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 MFSD6LQ8IWD5 586 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 RASSF8Q8NHQ8 419 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 E2F7Q96AV8 911 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 RMDN1Q96DB5 314 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 ZHX3Q9H4I2 956 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 SLITRK6Q9H5Y7 841 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 NDRG2Q9UN36 371 aaKnown RBP25.95■■□□□ 1.74
LSM4-202ENST00000593564 DERAQ9Y315 318 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 CEP250Q9BV73 2442 aa25.95■■□□□ 1.74
LSM4-202ENST00000593564 NCANO14594 1321 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 ALDH1A3P47895 512 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 MTAPQ13126 283 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 C9orf57Q5W0N0 161 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 DCLK2Q8N568 766 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 FAM3CQ92520 227 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 FAM212AQ96EL1 285 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 SENP8Q96LD8 212 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 IER2Q9BTL4 223 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 CHRDQ9H2X0 955 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 UPF2Q9HAU5 1272 aaKnown RBP25.94■■□□□ 1.74
LSM4-202ENST00000593564 ASB3Q9Y575 518 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 PIAS3Q9Y6X2 628 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 COL4A2P08572 1712 aa25.94■■□□□ 1.74
LSM4-202ENST00000593564 A0A1W2PRU2 124 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 MTMR11A4FU01 709 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 HEPACAM2A8MVW5 462 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 ARNTLO00327 626 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 ZNF263O14978 683 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 LILRB5O75023 590 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 NFICP08651 508 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 NMT1P30419 496 aaKnown RBP25.93■■□□□ 1.74
LSM4-202ENST00000593564 TMEM132DQ14C87 1099 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 MAMSTRQ6ZN01 415 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 ATAD1Q8NBU5 361 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 LARP4BQ92615 738 aaKnown RBP25.93■■□□□ 1.74
LSM4-202ENST00000593564 FAM126AQ9BYI3 521 aaPredicted RBP25.93■■□□□ 1.74
LSM4-202ENST00000593564 ST6GALNAC4Q9H4F1 302 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 HSFX1Q9UBD0 423 aa25.93■■□□□ 1.74
LSM4-202ENST00000593564 PIRO00625 290 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 CYP11A1P05108 521 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 MLLT6P55198 1093 aaPredicted RBP25.92■■□□□ 1.74
LSM4-202ENST00000593564 SF3A1Q15459 793 aaKnown RBP25.92■■□□□ 1.74
LSM4-202ENST00000593564 ARMCX5Q6P1M9 558 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 TSSK4Q6SA08 328 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 CCSER1Q9C0I3 900 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 EPC1Q9H2F5 836 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 ASB7Q9H672 318 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 SLC27A5Q9Y2P5 690 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 C2CD2Q9Y426 696 aa25.92■■□□□ 1.74
LSM4-202ENST00000593564 ANO9A1A5B4 782 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 ANKRD63C9JTQ0 380 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 SLFN12LQ6IEE8 588 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 PSMG2Q969U7 264 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 RSPRY1Q96DX4 576 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 TMEM209Q96SK2 561 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 STYXL1Q9Y6J8 313 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 DNAH14Q0VDD8 3507 aa25.91■■□□□ 1.74
LSM4-202ENST00000593564 FGF19O95750 216 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 DDIT3P35638 169 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 ACOT2P49753 483 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 POU5F1Q01860 360 aaKnown RBP25.9■■□□□ 1.74
LSM4-202ENST00000593564 FCHO2Q0JRZ9 810 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 ZC2HC1CQ53FD0 456 aaPredicted RBP25.9■■□□□ 1.74
LSM4-202ENST00000593564 ADALQ6DHV7 355 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 DNAJB7Q7Z6W7 309 aaPredicted RBP25.9■■□□□ 1.74
LSM4-202ENST00000593564 YAF2Q8IY57 180 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 TTC9BQ8N6N2 239 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 OR10T2Q8NGX3 314 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 MSANTD3Q96H12 275 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 NCDNQ9UBB6 729 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 DSEQ9UL01 958 aa25.9■■□□□ 1.74
LSM4-202ENST00000593564 TICRRQ7Z2Z1 1910 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 TISP43B9A030 160 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 CHADO15335 359 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 TDGF1P13385 188 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 STXBP5Q5T5C0 1151 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 GAREM2Q75VX8 874 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 ITIH5Q86UX2 942 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms