RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KCNV1Q6PIU1 500 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.15□□□□□ -1.42
SMAD4-216ENST00000593223 USP51Q70EK9 711 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 PROKR1Q8TCW9 393 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 MYEOVQ96EZ4 313 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 MRPL46Q9H2W6 279 aaKnown RBP6.15□□□□□ -1.42
SMAD4-216ENST00000593223 SARS2Q9NP81 518 aaKnown RBP6.15□□□□□ -1.42
SMAD4-216ENST00000593223 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 PRDM2Q13029 1718 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 GRIN2AQ12879 1464 aa6.15□□□□□ -1.43
SMAD4-216ENST00000593223 UNC119BA6NIH7 251 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ZNF785A8K8V0 405 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 FZD7O75084 574 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 PARNO95453 639 aaKnown RBP6.14□□□□□ -1.43
SMAD4-216ENST00000593223 AHSGP02765 367 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ANXA1P04083 346 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 GNAI2P04899 355 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 CFIP05156 583 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ADH4P08319 380 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 FCER1AP12319 257 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 NKX6-1P78426 367 aaPredicted RBP6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ZXDAP98168 799 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 SLFN5Q08AF3 891 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ZNF844Q08AG5 666 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ABHD18Q0P651 414 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 BEAN1Q3B7T3 259 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 LY6G5CQ5SRR4 150 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 FNDC7Q5VTL7 733 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 PPP4R4Q6NUP7 873 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 LRRC55Q6ZSA7 311 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 NOL8Q76FK4 1167 aaKnown RBP6.14□□□□□ -1.43
SMAD4-216ENST00000593223 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 FAM90A1Q86YD7 464 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 TMEM132CQ8N3T6 1108 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 TMIEQ8NEW7 156 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 LENG9Q96B70 501 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 KLHL32Q96NJ5 620 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 TLR10Q9BXR5 811 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 ALOXE3Q9BYJ1 711 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 C1orf112Q9NSG2 853 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 CHPF2Q9P2E5 772 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 STAP2Q9UGK3 403 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 MADDQ8WXG6 1647 aa6.14□□□□□ -1.43
SMAD4-216ENST00000593223 VSTM5A8MXK1 200 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 NARSO43776 548 aaKnown RBP6.13□□□□□ -1.43
SMAD4-216ENST00000593223 B3GALT2O43825 422 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 LPXNO60711 386 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 KCNJ5P48544 419 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 GUCY1B3Q02153 619 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 PIGFQ07326 219 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 FGL2Q14314 439 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 PTPAQ15257 358 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 KHDC1LQ5JSQ8 128 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 PDSS2Q86YH6 399 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
SMAD4-216ENST00000593223 SCAMP4Q969E2 229 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 MED15Q96RN5 788 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 RLIMQ9NVW2 624 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 GABBR1Q9UBS5 961 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 ZDHHC8Q9ULC8 765 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 PCDHA6Q9UN73 950 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 YEATS2Q9ULM3 1422 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 IQSEC2Q5JU85 1478 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 WDR97A6NE52 1622 aa6.13□□□□□ -1.43
SMAD4-216ENST00000593223 CCDC78A2IDD5 438 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 CDKL5O76039 1030 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 FSHBP01225 129 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ELANEP08246 267 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 RARBP10826 455 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ZFP36P26651 326 aaKnown RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 BMPR1AP36894 532 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 GDF5P43026 501 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ZNF135P52742 658 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 RAB1AP62820 205 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 CXADRP78310 365 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 KIF22Q14807 665 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 B3GNTL1Q67FW5 361 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ARMC6Q6NXE6 501 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 STRCQ7RTU9 1775 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 MRGPREQ86SM8 312 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 TEX14Q8IWB6 1497 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 FAM43AQ8N2R8 423 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 TTC8Q8TAM2 541 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 SMOQ99835 787 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 FAM204AQ9H8W3 233 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.12□□□□□ -1.43
SMAD4-216ENST00000593223 ANKFY1Q9P2R3 1169 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 HSFX1Q9UBD0 423 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 KCNE5Q9UJ90 142 aa6.12□□□□□ -1.43
SMAD4-216ENST00000593223 PTPRTO14522 1441 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 A0A088AWK7 358 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 CENPVL1A0A0U1RR11 272 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms